Pre_GI: BLASTP Hits

Some Help

Query: NC_007356:202131:215811 Dehalococcoides sp. CBDB1, complete genome

Start: 215811, End: 217034, Length: 1224

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002936:285527:2968752968752985931719Dehalococcoides ethenogenes 195, complete genometranscriptional regulator, putative1e-99363
NC_013890:1142500:1165306116530611664751170Dehalococcoides sp. GT chromosome, complete genomeFMN-binding domain protein9e-74277
NC_020387:1257163:1286934128693412881031170Dehalococcoides mccartyi BTF08, complete genomeCprC-like protein9e-74277
NC_010814:3048441:3075996307599630771441149Geobacter lovleyi SZ, complete genomeFMN-binding domain protein2e-26120
NC_011830:2811441:281928528192852820250966Desulfitobacterium hafniense DCB-2, complete genomeFMN-binding domain protein6e-25115
NC_019960:907238:9094759094759105361062Prevotella dentalis DSM 3688 chromosome 1, complete sequencehypothetical protein5e-0859.3