Pre_GI: BLASTP Hits

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Query: NC_006905:2175361:2203633 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2203633, End: 2204106, Length: 474

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:2062345:209137720913772091856480Salmonella bongori NCTC 12419, complete genomeO-antigen biosynthesis protein5e-84309
NC_010067:807129:809227809227809700474Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-84308
CP002185:2233732:226364022636402264122483Escherichia coli W, complete genomeGDP-mannose mannosyl hydrolase2e-68257
NC_008253:2134110:216358321635832164062480Escherichia coli 536, complete genomeGDP-mannose mannosyl hydrolase5e-68256
NC_011745:2302979:233469523346952335174480Escherichia coli ED1a chromosome, complete genomeGDP-mannose mannosyl hydrolase6e-68255
NC_011751:2395882:242455124245512425030480Escherichia coli UMN026 chromosome, complete genomeGDP-mannose mannosyl hydrolase9e-68255
NC_011740:2135141:214430821443082144811504Escherichia fergusonii ATCC 35469, complete genomeGDP-mannose mannosyl hydrolase9e-68255
NC_011415:2346474:236230623623062362806501Escherichia coli SE11 chromosome, complete genomeGDP-mannose mannosyl hydrolase2e-67254
NC_004431:2383901:241327924132792413761483Escherichia coli CFT073, complete genomeGDP-mannose mannosyl hydrolase2e-67254
NC_011601:2211917:222749722274972227997501Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeGDP-mannose mannosyl hydrolase2e-67253
NC_011741:2155947:218688621868862187365480Escherichia coli IAI1 chromosome, complete genomeGDP-mannose mannosyl hydrolase4e-67253
CU928160:2155947:218688621868862187365480Escherichia coli IAI1 chromosome, complete genomeGDP-mannose mannosyl hydrolase4e-67253
NC_013282:2827757:286012428601242860603480Cronobacter turicensis, complete genomeGDP-mannose mannosyl hydrolase3e-59226
NC_013008:2733203:274208027420802742589510Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeGDP-mannose mannosylhydrolase4e-55213
NC_011353:2734222:274309927430992743608510Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeGDP-mannose mannosyl hydrolase4e-55213
NC_002655:2839600:284847828484782848987510Escherichia coli O157:H7 EDL933, complete genomeGDP-mannose mannosylhydrolase4e-55213
NC_002695:2769387:277826427782642778773510Escherichia coli O157:H7 str. Sakai, complete genomeputative GDP-L-fucose pathway enzyme4e-55213
NC_013941:2544569:256492125649212565415495Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeGDP-mannose mannosyl hydrolase2e-51200
NC_012917:1506083:153146715314671531925459Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeNUDIX hydrolase1e-43175
NC_012731:3500545:353046135304613530919459Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeGDP-mannose mannosyl hydrolase2e-42171
NC_012691:2225000:223921622392162239683468Tolumonas auensis DSM 9187, complete genomeNUDIX hydrolase3e-41167
NC_013364:2672837:269030126903012690750450Escherichia coli O111:H- str. 11128, complete genomeputative GDP-mannose mannosylhydrolase3e-39160
NC_014012:1676983:168142616814261681917492Shewanella violacea DSS12, complete genomeGDP-mannose mannosyl hydrolase1e-37155
NC_018868:569423:593096593096593551456Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeNUDIX hydrolase1e-37154
NC_005139:343500:359606359606360088483Vibrio vulnificus YJ016 chromosome I, complete sequenceputative GDP-mannose mannosylhydrolase8e-36149
NC_008570:3220539:325274332527433253231489Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeGDP-mannose mannosyl hydrolase2e-30130
NC_007498:2087811:209745020974502097800351Pelobacter carbinolicus DSM 2380, complete genomeGDP-mannose mannosyl hydrolase4e-24110
NC_008781:3365468:337208133720813372644564Polaromonas naphthalenivorans CJ2, complete genomeNUDIX hydrolase4e-2097.1
NC_015955:581685:600161600161600613453Halophilic archaeon DL31 plasmid phalar01, complete sequenceNUDIX hydrolase3e-1787.4
NC_013202:1144192:116040611604061160834429Halomicrobium mukohataei DSM 12286, complete genomeNUDIX hydrolase4e-1787
NC_006396:1380882:140549314054931406137645Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceGDP-mannose mannosyl hydrolase5e-1786.7
NC_014735:199434:202775202775203218444Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completeADP-ribose pyrophosphatase1e-1479
NC_012914:336750:352974352974353372399Paenibacillus sp. JDR-2, complete genomeNUDIX hydrolase1e-0755.8
NC_013222:817686:836046836046836483438Robiginitalea biformata HTCC2501, complete genomeNudix (MutT) family hydrolase/pyrophosphatase5e-0753.5