Pre_GI: BLASTP Hits

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Query: NC_006856:26438:36536 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 36536, End: 36781, Length: 246

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007103:230872:249920249920250450531Bacillus cereus E33L plasmid pE33L466, complete sequencehypothetical protein1e-0962
NC_016023:2163000:218310821831082183689582Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein2e-0961.6
NC_011837:2605409:2620635262063526218551221Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-0959.7
NC_009706:2673906:2689132268913226903491218Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-0959.7
NC_009328:293000:351395351395351985591Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein1e-0858.5
NC_014666:4547873:456846945684694569056588Frankia sp. EuI1c chromosome, complete genomeprotein of unknown function UPF01572e-0857.8
NC_015757:263938:275258275258275830573Sulfobacillus acidophilus TPY chromosome, complete genomeprotein of unknown function UPF01579e-0855.5
NC_016884:256598:267918267918268490573Sulfobacillus acidophilus DSM 10332 chromosome, complete genomehypothetical protein9e-0855.5
NC_013406:3521489:355837835583783558893516Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein1e-0755.1
NC_015690:3477573:351172435117243512245522Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-0754.7
NC_012917:4646491:465959746595974660097501Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein4e-0753.5
NC_009925:2264858:228631822863182286860543Acaryochloris marina MBIC11017, complete genomehypothetical protein9e-0752.4
NC_013216:644408:6683196683196693621044Desulfotomaculum acetoxidans DSM 771, complete genomeprotein of unknown function UPF01573e-0650.4
NC_009648:1882500:189986718998671900385519Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein7e-0649.3
NC_016845:2655512:267384526738452674363519Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein8e-0649.3