Pre_GI: BLASTP Hits

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Query: NC_006177:324363:349324 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 349324, End: 350013, Length: 690

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015387:261799:268605268605269294690Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas5 family2e-85315
NC_014221:1786122:179122017912201791951732Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein Cas5 family2e-53208
NC_019673:2051363:208729120872912088007717Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein8e-40163
NC_014484:447889:455565455565456203639Spirochaeta thermophila DSM 6192 chromosome, complete genomeCRISPR-associated protein Cas5 family1e-38159
NC_005085:1269787:128782312878231288518696Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein5e-38157
NC_013947:3785332:379573337957333796428696Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCas5 family CRISPR-associated protein8e-38156
NC_020126:9726992:973796897379689738633666Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cas5 family protein2e-35149
NC_007947:621213:627026627026627703678Methylobacillus flagellatus KT, complete genomeCRISPR-associated protein, CT11345e-35147
NC_007777:3962000:396558639655863966251666Frankia sp. CcI3, complete genomehypothetical protein9e-35146
NC_007512:1459685:146767714676771468390714Pelodictyon luteolum DSM 273, complete genomeCRISPR-associated CT1134 family protein1e-33143
NC_019968:8397:157321573216463732Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated protein Cas5, subtype I-C/DVULG3e-33141
NC_009615:1354122:137497913749791375659681Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein9e-33140
NC_009337:1448607:145591914559191456629711Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated RAMP Csd5d family protein4e-32137
NC_015677:3685452:369383636938363694510675Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein1e-31136
NC_011060:1746000:175654217565421757177636Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas5 family2e-31135
NC_016012:665171:665171665171665851681Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeCRISPR-associated protein Cas5 family3e-31135
NC_014364:1116439:112280411228041123466663Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated protein Cas5 family3e-31135
NC_015976:1893076:190992819099281910593666Sphingobium sp. SYK-6, complete genomeCRISPR-associated protein Cas53e-30131
NC_013740:842841:876714876714877367654Acidaminococcus fermentans DSM 20731, complete genomeCRISPR-associated protein Cas5 family2e-29129
NC_014960:1380500:138919213891921389863672Anaerolinea thermophila UNI-1, complete genomehypothetical protein2e-29128
NC_008741:15699:374223742238105684Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein Cas5 family6e-29127
NC_013204:2305140:231718623171862317848663Eggerthella lenta DSM 2243, complete genomeCRISPR-associated protein Cas5 family1e-28126
NC_011963:1979136:198941419894141990094681Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated protein, Csd5d family2e-27122