Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1865563 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1865563, End: 1865919, Length: 357

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014934:765892:785739785739786083345Cellulophaga algicola DSM 14237 chromosome, complete genomehypothetical protein2e-24111
NC_012796:3600630:362093136209313621284354Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-23107
NC_008751:1043269:105893510589351059288354Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein2e-23107
AP010958:5361207:537649253764925376833342Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-22104
NC_011353:3276734:328260532826053282946342Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-22104
NC_013008:3231414:323747632374763237817342Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-22104
NC_013353:5361207:537649253764925376833342Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-22104
NC_013364:1183000:119375811937581194099342Escherichia coli O111:H- str. 11128, complete genomehypothetical protein5e-22103
NC_002655:1332961:134250113425011342842342Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W5e-22103
NC_014306:3524980:356956235695623569885324Erwinia billingiae Eb661, complete genomePutative phage-related protein3e-1580.5
NC_012803:1519138:152759415275941527920327Micrococcus luteus NCTC 2665, complete genomehypothetical protein7e-0649.3