Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1862000 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1862000, End: 1862362, Length: 363

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:1784000:182381018238101824172363Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-59228
NC_013283:113660:720472047587384Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein1e-1168.2
NC_007645:2049988:206265620626562063033378Hahella chejuensis KCTC 2396, complete genomeLactoylglutathione lyase2e-1064.3
NC_010161:2100500:210176321017632102110348Bartonella tribocorum CIP 105476, complete genomeputative phenazine antibiotic biosynthesis protein3e-0650.8