Pre_GI: BLASTP Hits

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Query: NC_004578:6089958:6119310 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6119310, End: 6119549, Length: 240

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:176885:186131186131186370240Pseudomonas syringae pv. phaseolicola 1448A, complete genomeaddiction module antitoxin RelB7e-38155
NC_008027:4953432:495509449550944955333240Pseudomonas entomophila L48, complete genomeRelB protein (antitoxin)4e-34143
NC_009708:2537557:254071525407152540954240Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebifunctional antitoxin/transcriptional repressor RelB1e-27121
NC_009999:38832:573785737857620243Shewanella baltica OS195 plasmid pS19502, complete sequenceaddiction module antitoxin, RelB/DinJ family3e-22103
NC_009997:2352948:238051423805142380756243Shewanella baltica OS195, complete genomeaddiction module antitoxin, RelB/DinJ family9e-2095.5
CU928160:1668842:168365616836561683895240Escherichia coli IAI1 chromosome, complete genomebifunctional antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor; Qin prophage4e-1993.6
NC_010473:1712984:173328217332821733521240Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor4e-1993.6
CP002185:1770815:178562817856281785867240Escherichia coli W, complete genomeQin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor4e-1993.6
CP002516:2305659:231998923199892320228240Escherichia coli KO11, complete genomeaddiction module antitoxin, RelB/DinJ family4e-1993.6
AC_000091:1627049:164734716473471647586240Escherichia coli W3110 DNA, complete genomebifunctional antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor4e-1993.6
NC_010468:2265423:227693222769322277171240Escherichia coli ATCC 8739, complete genomeaddiction module antitoxin, RelB/DinJ family4e-1993.6
NC_000913:1625500:164365716436571643896240Escherichia coli K12, complete genomeQin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor4e-1993.6
NC_009425:63709:906199061990858240Enterobacter sp. 638 plasmid pENTE01, complete sequencebifunctional antitoxin/transcriptional repressor RelB4e-1993.6
NC_011092:9974:148061480615045240Salmonella enterica subsp. enterica serovar Schwarzengrund strbifunctional antitoxin/transcriptional repressor RelB4e-1993.6
NC_016902:2305659:231998923199892320228240Escherichia coli KO11FL chromosome, complete genomeRelB/DinJ family addiction module antitoxin4e-1993.6
NC_013361:2138716:215470721547072154946240Escherichia coli O26:H11 str. 11368 chromosome, complete genomebifunctional antitoxin/transcriptional repressor RelB4e-1993.6
NC_012759:1517500:153571615357161535955240Escherichia coli BW2952 chromosome, complete genomebifunctional antitoxin/transcriptional repressor RelB4e-1993.6
NC_011741:1668842:168365616836561683895240Escherichia coli IAI1 chromosome, complete genomebifunctional antitoxin/transcriptional repressor RelB4e-1993.6
NC_008800:575141:582668582668582922255Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,bifunctional antitoxin/transcriptional repressor RelB8e-1475.9
NC_013961:2861949:286666028666602866887228Erwinia amylovora, complete genomeAntitoxin RelB6e-1269.7
NC_011365:1171536:120400112040011204264264Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomebifunctional antitoxin/transcriptional repressor RelB2e-1167.4
NC_010125:1051735:107344910734491073712264Gluconacetobacter diazotrophicus PAl 5, complete genomeputative RelB protein (antitoxin)2e-1064.7