Pre_GI: BLASTP Hits

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Query: NC_004578:2185907:2202040 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 2202040, End: 2202840, Length: 801

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3851433:385143338514333852224792Pseudomonas syringae pv. phaseolicola 1448A, complete genomeCAAX amino terminal protease family protein1e-119429
NC_007005:4062311:406518040651804065977798Pseudomonas syringae pv. syringae B728a, complete genomeAbortive infection protein1e-108392
NC_007492:2035761:205267020526702053461792Pseudomonas fluorescens PfO-1, complete genomeAbortive infection protein2e-55215
NC_014121:3235911:324275232427523243582831Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeCAAX amino terminal protease family protein4e-23108
NC_008601:168063:185846185846186718873Francisella tularensis subsp. novicida U112, complete genomehypothetical protein2e-1789.4
NC_007940:322948:322948322948323703756Rickettsia bellii RML369-C, complete genomehypothetical protein2e-1583.2
NC_007880:1830803:183235318323531833138786Francisella tularensis subsp. holarctica, complete genomehypothetical protein1e-0963.5
NC_009749:1825453:182699118269911827788798Francisella tularensis subsp. holarctica FTA, complete genomehypothetical protein5e-0858.5