Pre_GI: BLASTP Hits

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Query: NC_004547:442927:479801 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 479801, End: 480919, Length: 1119

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013385:1007616:1007616100761610087911176Ammonifex degensii KC4, complete genomeABC-2 type transporter1e-26120
NC_003228:2929006:2944478294447829456921215Bacteroides fragilis NCTC 9343, complete genomehypothetical protein2e-26120
NC_016776:2913966:2929458292945829306721215Bacteroides fragilis 638R, complete genomehypothetical protein2e-26120
NC_006347:2861498:2870907287090728720791173Bacteroides fragilis YCH46, complete genomehypothetical protein8e-26118
NC_010943:1426885:1452315145231514535021188Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane permease component of ABC transporter5e-24112
NC_015947:1290614:1308394130839413095811188Burkholderia sp. JV3 chromosome, complete genomeABC-2 type transporter7e-22105
NC_017249:3406570:3419551341955134218812331Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1996.7
NC_015164:3099097:3099097309909731003081212Bacteroides salanitronis DSM 18170 chromosome, complete genomeABC-2 type transporter2e-1893.6
NC_009253:3317533:3323384332338433245141131Desulfotomaculum reducens MI-1 chromosome, complete genomeABC-2 type transporter7e-1788.6
NC_004547:442927:4786174786174798071191Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein6e-1685.5
NC_016510:4343:4343434355121170Flavobacterium columnare ATCC 49512 chromosome, complete genomeABC-2 type transporter1e-1584.3
NC_014107:171170:1806981806981829592262Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,hypothetical protein6e-1582
NC_011883:1601552:1608075160807516092111137Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,ABC-2 type transporter3e-1480.1
NC_016745:3170384:3188836318883631899301095Oceanimonas sp. GK1 chromosome, complete genomemultidrug ABC transporter permease3e-1479.7
NC_020829:4390417:4392826439282643939981173Pseudomonas denitrificans ATCC 13867, complete genomeABC transporter1e-1378.2
NC_014655:2747399:2750437275043727515881152Leadbetterella byssophila DSM 17132 chromosome, complete genomeabc-2 type transporter2e-1376.6
NC_015172:2986867:3025179302517930263631185Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeABC-2 type transporter4e-1375.9
NC_010995:4297361:4317944431794443190591116Cellvibrio japonicus Ueda107, complete genomeABC-type multidrug transport system, permease component1e-1274.7
NC_015856:2646816:2649594264959426507451152Collimonas fungivorans Ter331 chromosome, complete genomemultidrug ABC transporter permease6e-1272
NC_011296:1542835:1558319155831915594521134Thermodesulfovibrio yellowstonii DSM 11347, complete genomeATPase component ABC-type multidrug transport system4e-1169.3
NC_009665:1831674:1831674183167418327951122Shewanella baltica OS185 chromosome, complete genomeABC-2 type transporter6e-1168.9
NC_018697:618832:6273226273226301112790Cycloclasticus sp. P1 chromosome, complete genomeABC transporter, ATP-binding protein/permease1e-1067.8
NC_002939:3108907:3110043311004331111731131Geobacter sulfurreducens PCA, complete genomehypothetical protein2e-1067
NC_007404:1126756:1142066114206611432021137Thiobacillus denitrificans ATCC 25259, complete genomeABC-2 type transport system permease protein4e-1066.2
NC_015164:3099097:3100321310032131015711251Bacteroides salanitronis DSM 18170 chromosome, complete genomeABC-2 type transporter4e-1065.9
NC_020829:4390417:4391683439168343928161134Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein9e-1064.7
NC_015574:2322811:2341886234188623430701185Methanobacterium sp. SWAN-1 chromosome, complete genomeABC-2 type transporter2e-0964.3
NC_014364:3707311:3709170370917037102791110Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeABC-2 type transporter2e-0963.9
NC_012731:5074000:5080056508005650811951140Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative ABC-type multidrug transport system permease component2e-0963.5
NC_009648:4359875:4365877436587743670161140Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ABC-type multidrug transport system, permease component2e-0963.5
NC_016845:5162481:5167756516775651688501095Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative ABC-type multidrug transport system, permease component6e-0962.4
NC_015947:1290614:1307270130727013083971128Burkholderia sp. JV3 chromosome, complete genomehypothetical protein2e-0860.8
NC_017059:747624:7623447623447651632820Rhodospirillum photometricum DSM 122, complete genomeABC transporter ATP-binding protein3e-0860.1
NC_016830:3869572:3894549389454938972872739Pseudomonas fluorescens F113 chromosome, complete genomemultidrug ABC transporter permease3e-0860.1
NC_010943:1426885:1451191145119114523181128Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane protein4e-0859.3
NC_010814:3673983:3675105367510536778942790Geobacter lovleyi SZ, complete genomeABC transporter related7e-0858.5
NC_014924:3334386:3335339333533933364331095Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeABC-2 type transporter8e-0858.5
NC_007759:2858240:2860098286009828612071110Syntrophus aciditrophicus SB, complete genomeexport ABC transporter permease protein1e-0758.2
NC_012691:2614603:2692038269203826948062769Tolumonas auensis DSM 9187, complete genomeABC transporter related1e-0757.8
NC_013850:109500:1206921206921218311140Klebsiella variicola At-22 chromosome, complete genomeABC-2 type transporter1e-0757.8
NC_011283:105245:1154961154961166351140Klebsiella pneumoniae 342 chromosome, complete genomeABC transporter permease1e-0757.8
NC_014614:478578:4964474964474975951149Clostridium sticklandii, complete genomeconserved membrane protein of unknown function2e-0757.4
NC_007759:2858240:2861146286114628623481203Syntrophus aciditrophicus SB, complete genomeexport ABC transporter permease protein7e-0755.5
NC_006347:2861498:2872063287206328732531191Bacteroides fragilis YCH46, complete genomehypothetical protein1e-0654.7
NC_003228:2929006:2945676294567629468661191Bacteroides fragilis NCTC 9343, complete genomehypothetical protein1e-0654.7
NC_016776:2913966:2930656293065629318461191Bacteroides fragilis 638R, complete genomehypothetical protein1e-0654.7
NC_007681:218921:2414322414322425591128Methanosphaera stadtmanae DSM 3091, complete genomeABC-type multidrug transport system, permease protein2e-0653.5
NC_020541:2264521:2266400226640022691352736Rhodanobacter sp. 2APBS1, complete genomeABC-type multidrug transport system, ATPase component2e-0653.5
NC_009454:1577319:1577319157731915784281110Pelotomaculum thermopropionicum SI, complete genomeABC-type multidrug transport system, permease component3e-0653.1