Pre_GI: BLASTP Hits

Some Help

Query: NC_004547:3817656:3836134 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 3836134, End: 3836901, Length: 768

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:3817656:383689838368983837677780Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative lipoprotein6e-122436
NC_015276:3321277:333133533313353332087753Marinomonas mediterranea MMB-1 chromosome, complete genomeAnkyrin5e-22104
NC_012918:4648220:465746246574624658274813Geobacter sp. M21 chromosome, complete genomeankyrin3e-1582
NC_011000:1397611:141119614111961411993798Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein3e-1375.5
NC_007109:401500:4044764044764080153540Rickettsia felis URRWXCal2, complete genomeGuanosine polyphosphate pyrophosphohydrolase/synthetase homolog2e-1273.2
NC_016514:2713834:276472127647212765482762Enterobacter cloacae EcWSU1 chromosome, complete genomeankyrin6e-1271.2
NC_011002:703194:729637729637730506870Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative ankyrin-repeat exported protein8e-1270.9
NC_013421:2613137:263606126360612636822762Pectobacterium wasabiae WPP163, complete genomeAnkyrin2e-1170.1
NC_010830:1836984:1842930184293018476874758Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1169.7
NC_003276:252217:2632472632472650671821Nostoc sp. PCC 7120 plasmid pCC7120alpha, complete sequencehypothetical protein4e-1168.6
NC_013421:2613137:263525526352552635998744Pectobacterium wasabiae WPP163, complete genomeputative lipoprotein5e-1168.2
NC_012225:212727:233675233675234421747Brachyspira hyodysenteriae WA1, complete genomeankyrin repeat-containing protein2e-1066.2
NC_012918:928903:971695971695972408714Geobacter sp. M21 chromosome, complete genomehypothetical protein4e-1065.1
NC_013173:1712138:1719837171983717212311395Desulfomicrobium baculatum DSM 4028, complete genomeAnkyrin8e-1064.3
NC_019908:2401577:2404689240468924068572169Brachyspira pilosicoli P43/6/78 chromosome, complete genomeankyrin repeat-containing protein2e-0963.2
NC_010981:425387:4416724416724443922721Wolbachia pipientis, complete genomeankyrin repeat domain protein3e-0962.4
NC_019908:2247956:2266295226629522686522358Brachyspira pilosicoli P43/6/78 chromosome, complete genomeankyrin repeat-containing protein5e-0961.6
NC_013665:1766158:1776022177602217783672346Methanocella paludicola SANAE, complete genomehypothetical protein9e-0960.8
NC_017243:2190000:2209564220956422119212358Brachyspira intermedia PWS/A chromosome, complete genomeankyrin repeat-containing protein1e-0860.5
NC_012918:928903:972426972426973235810Geobacter sp. M21 chromosome, complete genomeankyrin1e-0860.1
NC_012416:1332409:133945513394551340267813Wolbachia sp. wRi, complete genomeankyrin repeat domain protein2e-0859.3
NC_020211:3535622:354353935435393544228690Serratia marcescens WW4, complete genomehypothetical protein3e-0859.3
NC_014150:2501299:250419625041962504771576Brachyspira murdochii DSM 12563 chromosome, complete genomeAnkyrin4e-0858.9
NC_010830:1069666:1075078107507810772492172Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-0756.2
NC_014150:2798000:2801262280126228024371176Brachyspira murdochii DSM 12563 chromosome, complete genomeAnkyrin3e-0755.8
NC_020409:135699:1494081494081504181011Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein3e-0755.8
NC_010830:1451887:1458556145855614649246369Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-0755.1
NC_010830:475248:482192482192482878687Candidatus Amoebophilus asiaticus 5a2, complete genome5e-0755.1
NC_010830:1637598:1645106164510616473012196Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-0653.9
NC_020211:3535622:354436535443653545138774Serratia marcescens WW4, complete genomehypothetical protein1e-0653.5
NC_010830:384812:3939843939844012257242Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-0652.8
NC_019908:748635:751623751623752231609Brachyspira pilosicoli P43/6/78 chromosome, complete genomeankyrin repeat-containing protein2e-0652.8
NC_008576:2458573:2476139247613924776771539Magnetococcus sp. MC-1, complete genomeFOG: Ankyrin repeat-like protein2e-0652.8
NC_018607:895204:908485908485909399915Brachyspira pilosicoli B2904 chromosome, complete genomeankyrin repeat-containing protein3e-0652.4
NC_010644:718748:7261347261347272101077Elusimicrobium minutum Pei191, complete genomeankyrin3e-0652.4
NC_017243:1323870:133469413346941335446753Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein7e-0651.2
NC_003364:1081846:110061511006151101385771Pyrobaculum aerophilum str. IM2, complete genomehypothetical protein with 4 ankyrin repeats9e-0650.8