Pre_GI: BLASTP Hits

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Query: NC_004547:1873390:1905154 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1905154, End: 1905429, Length: 276

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:2209288:225713422571342257439306Escherichia coli ED1a chromosome, complete genomehypothetical protein8e-42168
NC_008253:1938975:195851519585151958790276Escherichia coli 536, complete genomehypothetical protein3e-39160
NC_011149:1987291:200770120077012007976276Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-38157
NC_011274:2044000:206423520642352064528294Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-34143
NC_011294:2053991:207310820731082073371264Salmonella enterica subsp. enterica serovar Enteritidis strmembrane protein4e-34142
NC_016831:947281:970040970040970303264Salmonella enterica subsp. enterica serovar Gallinarum/pullorummembrane protein4e-34142
NC_011205:2180598:220012522001252200304180Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-1889.7
NC_010067:191190:206516206516206788273Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0755.1
NC_011741:4570498:458745845874584587730273Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-0753.9
CU928160:4570498:458745845874584587730273Escherichia coli IAI1 chromosome, complete genomehypothetical protein, putative membrane protein3e-0753.9
NC_011094:2791719:280939728093972809669273Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-0753.5