Query: NC_004463:1717890 Bradyrhizobium japonicum USDA 110, complete genome
Start: 1717890, End: 1748152, Length: 30263
Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_011985:3892630 | 3892630 | 3924664 | 32035 | Agrobacterium radiobacter K84 chromosome 1, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_011987:53760 | 53760 | 83099 | 29340 | Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011987:362997 | 362997 | 390499 | 27503 | Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020453:3950838 | 3950838 | 3991099 | 40262 | Agromonas oligotrophica S58 DNA, complete genome | 0 | 2462 | BLASTN svg | BLASTP svg |
| NC_019973:5869500 | 5869500 | 5895386 | 25887 | Mesorhizobium australicum WSM2073, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_014923:5940500 | 5940500 | 5966426 | 25927 | Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_015675:6493444 | 6493444 | 6538296 | 44853 | Mesorhizobium opportunistum WSM2075 chromosome, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_011892:77975 | 77975 | 120406 | 42432 | Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_011894:4360577 | 4360577 | 4397099 | 36523 | Methylobacterium nodulans ORS 2060, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_011894:6418000* | 6418000 | 6443099 | 25100 | Methylobacterium nodulans ORS 2060, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_010505:1264758 | 1264758 | 1296728 | 31971 | Methylobacterium radiotolerans JCM 2831, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_007925:138927* | 138927 | 171099 | 32173 | Rhodopseudomonas palustris BisB18, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_011004:1174813 | 1174813 | 1198110 | 23298 | Rhodopseudomonas palustris TIE-1, complete genome | 8e-35 | 157 | BLASTN svg | BLASTP svg |
| NC_009720:5079048 | 5079048 | 5102099 | 23052 | Xanthobacter autotrophicus Py2, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |