Pre_GI: BLASTP Hits

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Query: NC_004463:1772541:1774921 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1774921, End: 1775604, Length: 684

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015386:107000:118734118734119438705Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete5e-1064.7
NC_008781:2611702:264536626453662646019654Polaromonas naphthalenivorans CJ2, complete genomeConjugal transfer protein8e-23107
NC_008577:1489643:150018115001811500885705Shewanella sp. ANA-3 chromosome 1, complete sequenceConjugal transfer protein8e-83306
NC_008757:77023:784097840979113705Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeConjugal transfer protein3e-80297
NC_012912:1295653:131580113158011316505705Dickeya zeae Ech1591, complete genomeConjugal transfer protein2e-70265
NC_010338:4148667:415366041536604154343684Caulobacter sp. K31, complete genomeConjugal transfer protein4e-98357
NC_013422:1755875:179195117919511792640690Halothiobacillus neapolitanus c2, complete genomeConjugal transfer protein2e-1789.4
NC_009937:4392108:441668044166804417369690Azorhizobium caulinodans ORS 571, complete genomeconjugal transfer protein3e-98357
NC_008254:534590:556379556379557068690Mesorhizobium sp. BNC1, complete genomeConjugal transfer protein4e-96350
NC_015850:110364:164052164052164723672Acidithiobacillus caldus SM-1 chromosome, complete genomeconjugal transfer protein5e-1064.7
NC_007925:3911323:392760739276073928290684Rhodopseudomonas palustris BisB18, complete genomeConjugal transfer protein5e-104377
NC_010725:3315007:331750833175083318191684Methylobacterium populi BJ001, complete genomeConjugal transfer protein9e-97352
NC_008686:1439328:143864214386421439331690Paracoccus denitrificans PD1222 chromosome 1, complete sequenceConjugal transfer protein5e-95347
NC_011666:1601983:160428216042821604962681Methylocella silvestris BL2, complete genomeConjugal transfer protein1e-92339
NC_010002:2933909:296132829613282962032705Delftia acidovorans SPH-1, complete genomeConjugal transfer protein1e-81302
NC_011992:1381843:138324713832471383951705Acidovorax ebreus TPSY, complete genomeConjugal transfer protein5e-79293
NC_015186:491930:493225493225493935711Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbF1e-65249
NC_013861:3341955:336241133624113363145735Legionella longbeachae NSW150, complete genomeConjugal transfer protein trbF1e-1376.6
NC_014834:3472000:350081835008183501501684Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugal transfer protein TrbF2e-109394
NC_014834:959986:982544982544983233690Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugal transfer protein TrbF1e-98358
NC_009485:8138314:813966381396638140343681Bradyrhizobium sp. BTAi1 chromosome, complete genomeconjugal transfer protein TrbF4e-97353
NC_009720:813157:829603829603830286684Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF3e-95347
NC_015410:3209954:321205632120563212763708Pseudomonas mendocina NK-01 chromosome, complete genomeconjugal transfer protein TrbF2e-73275
NC_014834:614890:619748619748620431684Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugal transfer protein TrbF5e-123439
NC_009720:750612:782182782182782871690Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF3e-100364
NC_009720:3210387:321038732103873211070684Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF3e-95347
NC_009720:4406991:442217044221704422859690Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF5e-94343
NC_013209:2582878:259136425913642592056693Acetobacter pasteurianus IFO 3283-01, complete genomeconjugal transfer protein TrbF9e-89326
NC_009656:3817261:383489038348903835594705Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer protein TrbF3e-80298
NC_014006:2932959:295394429539442954720777Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TrbF5e-75280
NC_010170:4800000:488554648855464886256711Bordetella petrii, complete genomeconjugal transfer protein TrbF7e-63240
NC_009668:529175:540102540102540791690Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer protein TrbF5e-102370
NC_009720:670853:675500675500676189690Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF2e-94345
NC_015422:1643000:165986916598691660573705Alicycliphilus denitrificans K601 chromosome, complete genomeconjugal transfer protein TrbF4e-81300
NC_015593:2914384:291571929157192916582864Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeconjugal transfer protein TrbF2e-70265
NC_015381:2859000:287418928741892874896708Burkholderia gladioli BSR3 chromosome 1, complete sequenceconjugal transfer protein TrbF6e-65246
NC_009720:3317642:333550033355003336183684Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF3e-98357
NC_014500:1862000:188247118824711882758288Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbF4e-1685.1
NC_014500:894136:898495898495899205711Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbF2e-72271
NC_006371:1743982:175426017542601754928669Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical conjugal transfer protein TrbF2e-1892.8
NC_015385:1875671:189654718965471897257711Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein3e-0858.5
NC_017249:2109843:211526521152652115948684Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein9e-126449
NC_015186:2839668:285753628575362858246711Acidiphilium multivorum AIU301, complete genomeputative conjugal transfer protein TrbF8e-61233
NC_010125:2813653:283188928318892832575687Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein trbF7e-90329
NC_010125:1011430:102773510277351028415681Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbF8e-93339
NC_018691:3082000:310480731048073105511705Alcanivorax dieselolei B5 chromosome, complete genomeTrbF-like protein2e-78291