Pre_GI: BLASTP Hits

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Query: NC_003888:7659639:7695016 Streptomyces coelicolor A3(2), complete genome

Start: 7695016, End: 7696275, Length: 1260

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:3600343:3634343363434336355751233Streptomyces scabiei 87.22 chromosome, complete genomelanthionine synthetase C-like protein2e-77290
NC_016111:2952338:2951070295107029523411272Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-70266
NC_016111:639819:6398196398196410451227Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-68260
NC_016111:613729:6398196398196410451227Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-68260
NC_018524:2246225:2259806225980622610591254Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomelanthionine synthetase C-like family protein1e-66254
NC_014666:8488567:8487324848732484885801257Frankia sp. EuI1c chromosome, complete genomeLanthionine synthetase C family protein7e-63241
NC_010572:4505428:4506390450639045076221233Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative lanthionine synthetase C-like protein1e-59231
NC_008278:6885254:6899154689915469003111158Frankia alni ACN14a, complete genomehypothetical protein1e-58227
NC_014391:4644500:4663131466313146643871257Micromonospora aurantiaca ATCC 27029 chromosome, complete genomelanthionine synthetase C family protein4e-56219
NC_009921:51034:6824068240694271188Frankia sp. EAN1pec, complete genomeLanthionine synthetase C family protein4e-52205
NC_008278:2933690:2949387294938729504601074Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative NisC-like domain (Nisin biosynthesis protein)1e-49197
NC_009921:8215996:8214923821492382159991077Frankia sp. EAN1pec, complete genomeLanthionine synthetase C family protein2e-47190
NC_018524:4599809:4606573460657346076461074Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomelanthionine synthetase C-like family protein2e-45183
NC_016047:3406488:3414804341480434161291326Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completesubtilin biosynthesis protein SpaC4e-22106
NC_014479:3245126:3257047325704732583721326Bacillus subtilis subsp. spizizenii str. W23 chromosome, completesubtilin biosynthesis protein SpaC6e-22105
NC_006510:310212:3332463332463345351290Geobacillus kaustophilus HTA426, complete genomelantibiotic biosynthesis protein1e-20101
NC_016593:353505:3710163710163723111296Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-20101
NC_009142:5519208:553731155373115538090780Saccharopolyspora erythraea NRRL 2338, complete genomelanthionine synthetase C-like7e-2098.6
NC_013947:5747385:5751659575165957528881230Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeLanthionine synthetase C family protein1e-1997.8
NC_009328:293000:3048733048733061801308Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeSpaC3e-1996.7
NC_013947:3785332:3830088383008838313171230Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeLanthionine synthetase C family protein2e-1790.9
NC_014976:2420000:2433172243317224344941323Bacillus subtilis BSn5 chromosome, complete genomelanthionine synthetase C-like protein5e-1479.3
NC_008021:879508:8877048877048889481245Streptococcus pyogenes MGAS9429, complete genomelanthionine synthetase1e-1274.7
NC_016610:61661:672056720568101897Tannerella forsythia ATCC 43037 chromosome, complete genomelanthionine synthetase C-like protein1e-0964.7