Pre_GI: BLASTP Hits

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Query: NC_003384:157158:177511 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid

Start: 177511, End: 177822, Length: 312

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a multidrug resistant strain of Salmonella typhi. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011748:4950723:497537349753734976041669Escherichia coli 55989, complete genomeputative Transcriptional regulator5e-54209
NC_011749:34056:427694276943437669Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetranscriptionnal regulator involved in tetracycline resistance5e-54209
NC_010939:405477:415026415026415694669Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTransposon Tn10 tetC protein (ORFL)5e-54209
CU928145:4950723:497537349753734976041669Escherichia coli 55989 chromosome, complete genomeputative Transcriptional regulator5e-54209
NC_020418:448687:460184460184460777594Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-54209
NC_017328:1075535:110535211053521105945594Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn10 tetC protein5e-54209
NC_016860:4055117:406238040623804062973594Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-54209
NC_013365:92973:980169801698270255Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete8e-42168