Pre_GI: BLASTP Hits

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Query: NC_002506:370629:410246 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 410246, End: 410593, Length: 348

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:410066410066410413348Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-60231
NC_012583:361241:421533421533421880348Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein1e-60231
NC_009456:787322:842062842062842409348Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-60231
NC_016945:370471:379080379080379427348Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-59228
NC_002506:370629:379262379262379609348Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein1e-59228
NC_017269:303500:310762310762310965204Vibrio cholerae LMA3984-4 chromosome II, complete sequencehypothetical protein1e-32138