Pre_GI: BLASTP Hits

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Query: NC_002506:370629:375613 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 375613, End: 376131, Length: 519

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009456:787322:903860903860904378519Vibrio cholerae O395 chromosome 1, complete sequenceputative acetyltransferase5e-97352
NC_016945:370471:375515375515375925411Vibrio cholerae IEC224 chromosome II, complete sequenceacetyltransferase1e-73275
NC_008321:2190000:219841121984112198833423Shewanella sp. MR-4, complete genomeGCN5-related N-acetyltransferase2e-1581.6
NC_018868:2458122:246628324662832466702420Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeGCN5-related N-acetyltransferase3e-1581.3
NC_015733:3923800:394016639401663940603438Pseudomonas putida S16 chromosome, complete genomeGCN5-like N-acetyltransferase3e-1581.3
NC_004129:4093610:411200041120004112461462Pseudomonas fluorescens Pf-5, complete genomeacetyltransferase, GNAT family7e-1270.1
NC_014500:2402881:241147924114792411931453Dickeya dadantii 3937 chromosome, complete genomeTPR repeat protein1e-0962.4
NC_006351:2759708:279670427967042797141438Burkholderia pseudomallei K96243 chromosome 2, complete sequenceacetyltransferase (GNAT) family protein2e-0858.2
NC_015379:2417312:241976824197682420202435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative acetyltransferase7e-0856.6
NC_016830:3869572:386957238695723870006435Pseudomonas fluorescens F113 chromosome, complete genomegcn5-related n-acetyltransferase9e-0856.2
NC_015383:229036:233714233714234151438Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceacetyltransferase GNAT family protein2e-0652
NC_012667:931390:994330994330994983654Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein3e-0651.6