Pre_GI: BLASTN Hits

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Query: NC_020207:843822 Enterococcus faecium NRRL B-2354, complete genome

Start: 843822, End: 870151, Length: 26330

Host Lineage: Enterococcus faecium; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen causes a range of infections similar to those observed with Enterococcus faecalis, including urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart). Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains and has led to the rise of vancomycin-resistant Staphylococcus aureus strains due to the horizontal transfer of Enterococcus antibiotic resistance genes. Little is known about the virulence mechanisms in this organism, but the genome does encode an esp gene for the surface adhesin. Vancomycin resistant isolates are more typically Enterococcus faecium than Enterococcus faecalis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020995:12055241205524124570640183Enterococcus casseliflavus EC20, complete genome4e-70274BLASTN svgBLASTP svg
NC_015634:359500*35950041145351954Bacillus coagulans 2-6 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_021175:19738801973880199624222363Streptococcus oligofermentans AS 1.3089, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020272:599064*59906462501625953Bacillus amyloliquefaciens IT-45, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012793:3275751*3275751330479129041Geobacillus sp. WCH70, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_020207:13465791346579138861142033Enterococcus faecium NRRL B-2354, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009800:21560912156091218719031100Escherichia coli HS, complete genome3e-0661.9BLASTN svgBLASTP svg