Query: NC_020134:2193900 Clostridium stercorarium subsp. stercorarium DSM 8532, complete
Start: 2193900, End: 2214452, Length: 20553
Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009012:1595498* | 1595498 | 1618175 | 22678 | Clostridium thermocellum ATCC 27405, complete genome | 8e-62 | 246 | BLASTN svg | BLASTP svg |
NC_003869:948000 | 948000 | 970767 | 22768 | Thermoanaerobacter tengcongensis MB4, complete genome | 8e-25 | 123 | BLASTN svg | BLASTP svg |
NC_014721:1629063* | 1629063 | 1652099 | 23037 | Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_006347:2899653* | 2899653 | 2922257 | 22605 | Bacteroides fragilis YCH46, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_003228:2973266* | 2973266 | 2996799 | 23534 | Bacteroides fragilis NCTC 9343, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_014393:4541000* | 4541000 | 4566440 | 25441 | Clostridium cellulovorans 743B chromosome, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_021182:2192718* | 2192718 | 2216463 | 23746 | Clostridium pasteurianum BC1, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013216:3408608* | 3408608 | 3433785 | 25178 | Desulfotomaculum acetoxidans DSM 771, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015311:2689118* | 2689118 | 2714099 | 24982 | Prevotella denticola F0289 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015581:1043394 | 1043394 | 1081837 | 38444 | Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015682:736746* | 736746 | 766035 | 29290 | Thermodesulfobacterium sp. OPB45 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007644:626992* | 626992 | 699734 | 72743 | Moorella thermoacetica ATCC 39073, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013525:1871795 | 1871795 | 1900237 | 28443 | Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009881:236500 | 236500 | 255852 | 19353 | Rickettsia akari str. Hartford, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014328:4471995* | 4471995 | 4502155 | 30161 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012781:4065* | 4065 | 24599 | 20535 | Eubacterium rectale ATCC 33656, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_000963:205546 | 205546 | 227725 | 22180 | Rickettsia prowazekii str. Madrid E, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014364:2246524* | 2246524 | 2283736 | 37213 | Spirochaeta smaragdinae DSM 11293 chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_014253:312354* | 312354 | 346013 | 33660 | Methanohalobium evestigatum Z-7303 chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |