Query: NC_015951:71697 Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete
Start: 71697, End: 95286, Length: 23590
Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_015951:46000 | 46000 | 78901 | 32902 | Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete | 0 | 3753 | BLASTN svg | BLASTP svg |
NC_015951:107360 | 107360 | 125429 | 18070 | Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete | 3e-61 | 244 | BLASTN svg | BLASTP svg |
NC_015957:5225903 | 5225903 | 5248153 | 22251 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_020126:4517133* | 4517133 | 4557585 | 40453 | Myxococcus stipitatus DSM 14675, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_020126:3383902* | 3383902 | 3421387 | 37486 | Myxococcus stipitatus DSM 14675, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007651:2639553* | 2639553 | 2691724 | 52172 | Burkholderia thailandensis E264 chromosome I, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_020453:1084238 | 1084238 | 1144897 | 60660 | Agromonas oligotrophica S58 DNA, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_020453:1072979 | 1072979 | 1120471 | 47493 | Agromonas oligotrophica S58 DNA, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015738:3042000* | 3042000 | 3065968 | 23969 | Eggerthella sp. YY7918, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014722:1971305* | 1971305 | 1999359 | 28055 | Burkholderia rhizoxinica HKI 454, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014483:4532000* | 4532000 | 4586554 | 54555 | Paenibacillus polymyxa E681 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |