Pre_GI: BLASTN Hits

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Query: NC_015951:71697 Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete

Start: 71697, End: 95286, Length: 23590

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014722:1971305*1971305199935928055Burkholderia rhizoxinica HKI 454, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_015738:3042000*3042000306596823969Eggerthella sp. YY7918, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020126:3383902*3383902342138737486Myxococcus stipitatus DSM 14675, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020126:4517133*4517133455758540453Myxococcus stipitatus DSM 14675, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014483:4532000*4532000458655454555Paenibacillus polymyxa E681 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015957:52259035225903524815322251Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015951:46000460007890132902Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete03753BLASTN svgBLASTP svg
NC_015951:10736010736012542918070Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete3e-61244BLASTN svgBLASTP svg