Query: NC_014323:5219154 Herbaspirillum seropedicae SmR1 chromosome, complete genome
Start: 5219154, End: 5242118, Length: 22965
Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria
General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010645:369408 | 369408 | 406782 | 37375 | Bordetella avium 197N, complete genome | 0 | 815 | BLASTN svg | BLASTP svg |
| NC_007509:971500 | 971500 | 991166 | 19667 | Burkholderia sp. 383 chromosome 3, complete sequence | 4e-138 | 500 | BLASTN svg | BLASTP svg |
| NC_015376:2010009 | 2010009 | 2040694 | 30686 | Burkholderia gladioli BSR3 chromosome chromosome 2, complete | 5e-128 | 466 | BLASTN svg | BLASTP svg |
| NC_011901:625712 | 625712 | 665313 | 39602 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 4e-45 | 190 | BLASTN svg | BLASTP svg |
| NC_010552:1212000 | 1212000 | 1234429 | 22430 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 1e-33 | 153 | BLASTN svg | BLASTP svg |
| NC_014623:1633889 | 1633889 | 1655069 | 21181 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 9e-28 | 133 | BLASTN svg | BLASTP svg |
| NC_007973:3240866 | 3240866 | 3265911 | 25046 | Ralstonia metallidurans CH34 chromosome 1, complete sequence | 5e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_010002:2933909 | 2933909 | 2972504 | 38596 | Delftia acidovorans SPH-1, complete genome | 5e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_010552:2541100 | 2541100 | 2562611 | 21512 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 8e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_008391:1768456 | 1768456 | 1792099 | 23644 | Burkholderia cepacia AMMD chromosome 2, complete sequence | 8e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_014394:942015 | 942015 | 966637 | 24623 | Gallionella capsiferriformans ES-2 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_014562:3985500* | 3985500 | 4003170 | 17671 | Pantoea vagans C9-1 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_009832:4521585 | 4521585 | 4551124 | 29540 | Serratia proteamaculans 568, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_014532:2664139 | 2664139 | 2712599 | 48461 | Halomonas elongata DSM 2581, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_010816:2326453* | 2326453 | 2353688 | 27236 | Bifidobacterium longum DJO10A, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010545:1475410 | 1475410 | 1514272 | 38863 | Corynebacterium urealyticum DSM 7109, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_015052:1771976* | 1771976 | 1800283 | 28308 | Bifidobacterium longum subsp. infantis 157F, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_014815:6616500* | 6616500 | 6711958 | 95459 | Micromonospora sp. L5 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_004307:2208591* | 2208591 | 2236917 | 28327 | Bifidobacterium longum NCC2705, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_007974:1607500 | 1607500 | 1628879 | 21380 | Ralstonia metallidurans CH34 chromosome 2, complete sequence | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_015500:484984 | 484984 | 516975 | 31992 | Treponema brennaborense DSM 12168 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015677:3179910 | 3179910 | 3215890 | 35981 | Ramlibacter tataouinensis TTB310 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_002927:383760* | 383760 | 406791 | 23032 | Bordetella bronchiseptica RB50, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014323:4792048* | 4792048 | 4836099 | 44052 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015458:2614108* | 2614108 | 2643887 | 29780 | Pusillimonas sp. T7-7 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_007948:4646344* | 4646344 | 4694388 | 48045 | Polaromonas sp. JS666, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |