Pre_GI: BLASTN Hits

Some Help

Query: NC_014323:5219154 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 5219154, End: 5242118, Length: 22965

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010645:36940836940840678237375Bordetella avium 197N, complete genome0815BLASTN svgBLASTP svg
NC_007509:97150097150099116619667Burkholderia sp. 383 chromosome 3, complete sequence4e-138500BLASTN svgBLASTP svg
NC_015376:20100092010009204069430686Burkholderia gladioli BSR3 chromosome chromosome 2, complete5e-128466BLASTN svgBLASTP svg
NC_011901:62571262571266531339602Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete4e-45190BLASTN svgBLASTP svg
NC_010552:12120001212000123442922430Burkholderia ambifaria MC40-6 chromosome 2, complete sequence1e-33153BLASTN svgBLASTP svg
NC_014623:16338891633889165506921181Stigmatella aurantiaca DW4/3-1 chromosome, complete genome9e-28133BLASTN svgBLASTP svg
NC_007973:32408663240866326591125046Ralstonia metallidurans CH34 chromosome 1, complete sequence5e-26127BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome5e-26127BLASTN svgBLASTP svg
NC_010552:25411002541100256261121512Burkholderia ambifaria MC40-6 chromosome 2, complete sequence8e-22113BLASTN svgBLASTP svg
NC_008391:17684561768456179209923644Burkholderia cepacia AMMD chromosome 2, complete sequence8e-22113BLASTN svgBLASTP svg
NC_014394:94201594201596663724623Gallionella capsiferriformans ES-2 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_014562:3985500*3985500400317017671Pantoea vagans C9-1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009832:45215854521585455112429540Serratia proteamaculans 568, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014532:26641392664139271259948461Halomonas elongata DSM 2581, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010816:2326453*2326453235368827236Bifidobacterium longum DJO10A, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010545:14754101475410151427238863Corynebacterium urealyticum DSM 7109, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015052:1771976*1771976180028328308Bifidobacterium longum subsp. infantis 157F, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014815:6616500*6616500671195895459Micromonospora sp. L5 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_004307:2208591*2208591223691728327Bifidobacterium longum NCC2705, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007974:16075001607500162887921380Ralstonia metallidurans CH34 chromosome 2, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_015500:48498448498451697531992Treponema brennaborense DSM 12168 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015677:31799103179910321589035981Ramlibacter tataouinensis TTB310 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002927:383760*38376040679123032Bordetella bronchiseptica RB50, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007948:4646344*4646344469438848045Polaromonas sp. JS666, complete genome3e-0661.9BLASTN svgBLASTP svg