Query: NC_014323:1196209 Herbaspirillum seropedicae SmR1 chromosome, complete genome
Start: 1196209, End: 1232659, Length: 36451
Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria
General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_020211:4598217 | 4598217 | 4630620 | 32404 | Serratia marcescens WW4, complete genome | 6e-64 | 254 | BLASTN svg | BLASTP svg |
| NC_014500:2688095 | 2688095 | 2713286 | 25192 | Dickeya dadantii 3937 chromosome, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
| NC_015259:734795 | 734795 | 766247 | 31453 | Polymorphum gilvum SL003B-26A1 chromosome, complete genome | 3e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_008463:282565* | 282565 | 320736 | 38172 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 5e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_010505:5583000 | 5583000 | 5604204 | 21205 | Methylobacterium radiotolerans JCM 2831, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_020209:4643901 | 4643901 | 4667113 | 23213 | Pseudomonas poae RE*1-1-14, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_007005:98488* | 98488 | 136931 | 38444 | Pseudomonas syringae pv. syringae B728a, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_009792:4693152 | 4693152 | 4719999 | 26848 | Citrobacter koseri ATCC BAA-895, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_010623:1871492 | 1871492 | 1942094 | 70603 | Burkholderia phymatum STM815 chromosome 2, complete sequence | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015859:1069116 | 1069116 | 1095419 | 26304 | Corynebacterium variabile DSM 44702 chromosome, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_010087:319063 | 319063 | 367599 | 48537 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_020064:79422* | 79422 | 125241 | 45820 | Serratia marcescens FGI94, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015376:3320818 | 3320818 | 3358283 | 37466 | Burkholderia gladioli BSR3 chromosome chromosome 2, complete | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010801:550270 | 550270 | 596634 | 46365 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015379:4282815* | 4282815 | 4303751 | 20937 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_013204:3419817* | 3419817 | 3442243 | 22427 | Eggerthella lenta DSM 2243, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |