Pre_GI: BLASTN Hits

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Query: NC_014323:1196209 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 1196209, End: 1232659, Length: 36451

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome6e-64254BLASTN svgBLASTP svg
NC_014500:26880952688095271328625192Dickeya dadantii 3937 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_015259:73479573479576624731453Polymorphum gilvum SL003B-26A1 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_010505:55830005583000560420421205Methylobacterium radiotolerans JCM 2831, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_020209:46439014643901466711323213Pseudomonas poae RE*1-1-14, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009792:46931524693152471999926848Citrobacter koseri ATCC BAA-895, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010623:18714921871492194209470603Burkholderia phymatum STM815 chromosome 2, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_015859:10691161069116109541926304Corynebacterium variabile DSM 44702 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010087:31906331906336759948537Burkholderia multivorans ATCC 17616 chromosome 3, complete7e-0867.9BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015376:33208183320818335828337466Burkholderia gladioli BSR3 chromosome chromosome 2, complete7e-0867.9BLASTN svgBLASTP svg
NC_010801:55027055027059663446365Burkholderia multivorans ATCC 17616 chromosome 3, complete7e-0867.9BLASTN svgBLASTP svg
NC_015379:4282815*4282815430375120937Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0765.9BLASTN svgBLASTP svg
NC_013204:3419817*3419817344224322427Eggerthella lenta DSM 2243, complete genome4e-0661.9BLASTN svgBLASTP svg