Pre_GI: BLASTN Hits

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Query: NC_013929:7278414 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 7278414, End: 7311924, Length: 33511

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015434:3755560*3755560378375828199Verrucosispora maris AB-18-032 chromosome, complete genome3e-53218BLASTN svgBLASTP svg
NC_015957:27557092755709278074725039Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-46196BLASTN svgBLASTP svg
NC_015588:12138731213873125011736245Isoptericola variabilis 225 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_013131:80296218029621805301123391Catenulispora acidiphila DSM 44928, complete genome3e-28135BLASTN svgBLASTP svg
NC_013757:38974133897413393181534403Geodermatophilus obscurus DSM 43160, complete genome1e-24123BLASTN svgBLASTP svg
NC_014659:17311211731121175858327463Rhodococcus equi 103S, complete genome5e-24121BLASTN svgBLASTP svg
NC_008278:6854759*6854759688205327295Frankia alni ACN14a, complete genome5e-21111BLASTN svgBLASTP svg
NC_004369:30826913082691310589623206Corynebacterium efficiens YS-314, complete genome7e-20107BLASTN svgBLASTP svg
NC_015576:61216461216467488062717Mycobacterium sp. JDM601 chromosome, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_013595:86031888603188863891935732Streptosporangium roseum DSM 43021, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_008697:55406554068532429919Nocardioides sp. JS614 plasmid pNOCA01, complete sequence3e-1385.7BLASTN svgBLASTP svg
NC_014151:36632953663295368650923215Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014391:1967167*1967167200915941993Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009142:2480608*2480608252218941582Saccharopolyspora erythraea NRRL 2338, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013441:382597*38259742422241626Gordonia bronchialis DSM 43247, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003888:73374537337453737640338951Streptomyces coelicolor A3(2), complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015957:10505870105058701052808222213Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014318:85900788590078860983119754Amycolatopsis mediterranei U32 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019902:23069612306961233161224652Thioalkalivibrio nitratireducens DSM 14787, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015656:632960*63296066311030151Frankia symbiont of Datisca glomerata chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg