Pre_GI: BLASTN Hits

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Query: NC_013929:5097389 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5097389, End: 5116957, Length: 19569

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:5302280*5302280532158519306Streptomyces avermitilis MA-4680, complete genome01614BLASTN svgBLASTP svg
NC_006087:28490*284907567147182Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-26129BLASTN svgBLASTP svg
NC_003888:32134321345153919406Streptomyces coelicolor A3(2), complete genome4e-20107BLASTN svgBLASTP svg
NC_013757:21245212454675925515Geodermatophilus obscurus DSM 43160, complete genome7e-19103BLASTN svgBLASTP svg
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome7e-19103BLASTN svgBLASTP svg
NC_008146:20047*200475317433128Mycobacterium sp. MCS, complete genome7e-19103BLASTN svgBLASTP svg
NC_004369:41236*412366188820653Corynebacterium efficiens YS-314, complete genome3e-18101BLASTN svgBLASTP svg
NC_015514:33972*339726268928718Cellulomonas fimi ATCC 484 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_010545:11950*119506085348904Corynebacterium urealyticum DSM 7109, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_002935:48687*486876982821142Corynebacterium diphtheriae NCTC 13129, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014151:30488*304886009929612Cellulomonas flavigena DSM 20109 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_014215:49285549285551339920545Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-1281.8BLASTN svgBLASTP svg
NC_018581:32092*320925119319102Gordonia sp. KTR9 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015671:20114622011462203421622755Cellvibrio gilvus ATCC 13127 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015656:3232809*3232809325197319165Frankia symbiont of Datisca glomerata chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014815:43857594385759442159935841Micromonospora sp. L5 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014391:4672105*4672105470459932495Micromonospora aurantiaca ATCC 27029 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005835:823187*82318784808124895Thermus thermophilus HB27, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010545:1691999*1691999172113729139Corynebacterium urealyticum DSM 7109, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015673:52563852563854925123614Corynebacterium resistens DSM 45100 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012590:37697*376977357935883Corynebacterium aurimucosum ATCC 700975, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010337:98974*9897412939030417Heliobacterium modesticaldum Ice1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014964:1695000*1695000172192326924Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete9e-0660BLASTN svgBLASTP svg
NC_006361:29200282920028293981019783Nocardia farcinica IFM 10152, complete genome9e-0660BLASTN svgBLASTP svg