Query: NC_013929:1799594 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 1799594, End: 1823800, Length: 24207
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_014151:3663295 | 3663295 | 3686509 | 23215 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 5e-51 | 210 | BLASTN svg | BLASTP svg |
NC_013595:8603188 | 8603188 | 8638919 | 35732 | Streptosporangium roseum DSM 43021, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
NC_008697:55406 | 55406 | 85324 | 29919 | Nocardioides sp. JS614 plasmid pNOCA01, complete sequence | 2e-29 | 139 | BLASTN svg | BLASTP svg |
NC_014151:3611956 | 3611956 | 3663282 | 51327 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 9e-28 | 133 | BLASTN svg | BLASTP svg |
NC_015942:355944 | 355944 | 386713 | 30770 | Acidithiobacillus ferrivorans SS3 chromosome, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_010172:280092* | 280092 | 309840 | 29749 | Methylobacterium extorquens PA1, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_015711:3122000 | 3122000 | 3149844 | 27845 | Myxococcus fulvus HW-1 chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_007333:810381* | 810381 | 854662 | 44282 | Thermobifida fusca YX, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_015572:3091707* | 3091707 | 3132676 | 40970 | Methylomonas methanica MC09 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_012811:1105395 | 1105395 | 1129599 | 24205 | Methylobacterium extorquens AM1 megaplasmid, complete sequence | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008686:1472899 | 1472899 | 1500635 | 27737 | Paracoccus denitrificans PD1222 chromosome 1, complete sequence | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014210:3248526 | 3248526 | 3273061 | 24536 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013757:3897413 | 3897413 | 3931815 | 34403 | Geodermatophilus obscurus DSM 43160, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008782:867344* | 867344 | 890099 | 22756 | Acidovorax sp. JS42, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013440:1131376 | 1131376 | 1159954 | 28579 | Haliangium ochraceum DSM 14365, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |