Query: NC_013315:3978495 Clostridium difficile CD196 chromosome, complete genome
Start: 3978495, End: 3998242, Length: 19748
Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009089:4177117 | 4177117 | 4200707 | 23591 | Clostridium difficile 630, complete genome | 0 | 17620 | BLASTN svg | BLASTP svg |
| NC_014328:2990790* | 2990790 | 3032099 | 41310 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 3e-178 | 632 | BLASTN svg | BLASTP svg |
| NC_004557:2037500 | 2037500 | 2057599 | 20100 | Clostridium tetani E88, complete genome | 3e-135 | 490 | BLASTN svg | BLASTP svg |
| NC_019978:875941* | 875941 | 900796 | 24856 | Halobacteroides halobius DSM 5150, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_011898:702983 | 702983 | 721099 | 18117 | Clostridium cellulolyticum H10, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_021182:1654903 | 1654903 | 1676782 | 21880 | Clostridium pasteurianum BC1, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_013517:2815482 | 2815482 | 2837696 | 22215 | Sebaldella termitidis ATCC 33386, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_015555:211935 | 211935 | 232099 | 20165 | Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_014721:1629063* | 1629063 | 1652099 | 23037 | Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_014150:2798000 | 2798000 | 2821103 | 23104 | Brachyspira murdochii DSM 12563 chromosome, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_007350:1629694* | 1629694 | 1652388 | 22695 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305, | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_006274:3773335* | 3773335 | 3800461 | 27127 | Bacillus cereus E33L, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015958:2527376 | 2527376 | 2550139 | 22764 | Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013123:116465* | 116465 | 136290 | 19826 | Candidatus Sulcia muelleri SMDSEM, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014829:4511738 | 4511738 | 4548072 | 36335 | Bacillus cellulosilyticus DSM 2522 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_002973:1877905* | 1877905 | 1903183 | 25279 | Listeria monocytogenes str. 4b F2365, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |