Pre_GI: BLASTN Hits

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Query: NC_012660:1804610 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 1804610, End: 1835124, Length: 30515

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome08790BLASTN svgBLASTP svg
NC_004129:4993974*4993974502072326750Pseudomonas fluorescens Pf-5, complete genome06930BLASTN svgBLASTP svg
NC_015379:1887275*1887275191854531271Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,06266BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome01865BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome01715BLASTN svgBLASTP svg
NC_015410:2144387*2144387217909934713Pseudomonas mendocina NK-01 chromosome, complete genome01556BLASTN svgBLASTP svg
NC_009439:2038303*2038303206823929937Pseudomonas mendocina ymp, complete genome01522BLASTN svgBLASTP svg
NC_008463:2017607*2017607204360726001Pseudomonas aeruginosa UCBPP-PA14, complete genome01352BLASTN svgBLASTP svg
NC_011770:2046490*2046490207050324014Pseudomonas aeruginosa LESB58, complete genome01344BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-141511BLASTN svgBLASTP svg
NC_012997:1446037*1446037147363527599Teredinibacter turnerae T7901, complete genome6e-119436BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome5e-76293BLASTN svgBLASTP svg
NC_009654:3215205*3215205324567930475Marinomonas sp. MWYL1, complete genome2e-51212BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome1e-27133BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome1e-24123BLASTN svgBLASTP svg
NC_015740:25873232587323260752820206Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-21113BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_007404:974461974461101843943979Thiobacillus denitrificans ATCC 25259, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_008712:21549921549924259227094Arthrobacter aurescens TC1 plasmid TC1, complete sequence1e-1593.7BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_005363:16043371604337164409939763Bdellovibrio bacteriovorus HD100, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_008781:2925818*2925818294540419587Polaromonas naphthalenivorans CJ2, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008314:36500365005712620627Ralstonia eutropha H16 chromosome 2, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_011060:51487451487456528450411Pelodictyon phaeoclathratiforme BU-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010506:2046000*2046000208082534826Shewanella woodyi ATCC 51908, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013282:28277572827757286060332847Cronobacter turicensis, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006513:34865583486558351342826871Azoarcus sp. EbN1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010524:1005355*1005355103237727023Leptothrix cholodnii SP-6, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014313:16549016549018947823989Hyphomicrobium denitrificans ATCC 51888 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_015160:35853543585354360400918656Odoribacter splanchnicus DSM 20712 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009901:1693500*1693500173209938600Shewanella pealeana ATCC 700345, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_002928:12312612312616356640441Bordetella parapertussis 12822, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_002927:11898211898216220243221Bordetella bronchiseptica RB50, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_021171:45194954519495453887119377Bacillus sp. 1NLA3E, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011146:3720658*3720658375266832011Geobacter bemidjiensis Bem, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010170:50877425087742511517327432Bordetella petrii, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002939:24546862454686247498020295Geobacter sulfurreducens PCA, complete genome4e-0661.9BLASTN svgBLASTP svg