Query: NC_012490:3094857 Rhodococcus erythropolis PR4, complete genome
Start: 3094857, End: 3121255, Length: 26399
Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015635:4097711 | 4097711 | 4132093 | 34383 | Microlunatus phosphovorus NM-1, complete genome | 0 | 682 | BLASTN svg | BLASTP svg |
| NC_002937:2068117* | 2068117 | 2144645 | 76529 | Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete | 2e-50 | 208 | BLASTN svg | BLASTP svg |
| NC_013131:2517861* | 2517861 | 2536986 | 19126 | Catenulispora acidiphila DSM 44928, complete genome | 5e-42 | 180 | BLASTN svg | BLASTP svg |
| NC_006958:1771796* | 1771796 | 1797656 | 25861 | Corynebacterium glutamicum ATCC 13032, complete genome | 4e-33 | 151 | BLASTN svg | BLASTP svg |
| NC_003450:1770324* | 1770324 | 1798757 | 28434 | Corynebacterium glutamicum ATCC 13032, complete genome | 4e-33 | 151 | BLASTN svg | BLASTP svg |
| NC_008740:637870 | 637870 | 658717 | 20848 | Marinobacter aquaeolei VT8, complete genome | 1e-30 | 143 | BLASTN svg | BLASTP svg |
| NC_013174:1459730* | 1459730 | 1482664 | 22935 | Jonesia denitrificans DSM 20603, complete genome | 3e-28 | 135 | BLASTN svg | BLASTP svg |
| NC_010545:1089286* | 1089286 | 1109015 | 19730 | Corynebacterium urealyticum DSM 7109, complete genome | 3e-28 | 135 | BLASTN svg | BLASTP svg |
| NC_021064:1211480* | 1211480 | 1239505 | 28026 | Propionibacterium avidum 44067, complete genome | 1e-27 | 133 | BLASTN svg | BLASTP svg |
| NC_013165:329185 | 329185 | 389341 | 60157 | Slackia heliotrinireducens DSM 20476, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_007722:2954876 | 2954876 | 2990924 | 36049 | Erythrobacter litoralis HTCC2594, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_013757:1438812 | 1438812 | 1473599 | 34788 | Geodermatophilus obscurus DSM 43160, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_002947:2809591* | 2809591 | 2832649 | 23059 | Pseudomonas putida KT2440, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_012660:4558122* | 4558122 | 4592341 | 34220 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015683:1432995* | 1432995 | 1456327 | 23333 | Corynebacterium ulcerans BR-AD22 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014329:1298644* | 1298644 | 1317135 | 18492 | Corynebacterium pseudotuberculosis FRC41 chromosome, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |