Pre_GI: BLASTN Hits

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Query: NC_012490:3094857 Rhodococcus erythropolis PR4, complete genome

Start: 3094857, End: 3121255, Length: 26399

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015635:40977114097711413209334383Microlunatus phosphovorus NM-1, complete genome0682BLASTN svgBLASTP svg
NC_002937:2068117*2068117214464576529Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete2e-50208BLASTN svgBLASTP svg
NC_013131:2517861*2517861253698619126Catenulispora acidiphila DSM 44928, complete genome5e-42180BLASTN svgBLASTP svg
NC_006958:1771796*1771796179765625861Corynebacterium glutamicum ATCC 13032, complete genome4e-33151BLASTN svgBLASTP svg
NC_003450:1770324*1770324179875728434Corynebacterium glutamicum ATCC 13032, complete genome4e-33151BLASTN svgBLASTP svg
NC_008740:63787063787065871720848Marinobacter aquaeolei VT8, complete genome1e-30143BLASTN svgBLASTP svg
NC_013174:1459730*1459730148266422935Jonesia denitrificans DSM 20603, complete genome3e-28135BLASTN svgBLASTP svg
NC_010545:1089286*1089286110901519730Corynebacterium urealyticum DSM 7109, complete genome3e-28135BLASTN svgBLASTP svg
NC_021064:1211480*1211480123950528026Propionibacterium avidum 44067, complete genome1e-27133BLASTN svgBLASTP svg
NC_013165:32918532918538934160157Slackia heliotrinireducens DSM 20476, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_007722:29548762954876299092436049Erythrobacter litoralis HTCC2594, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013757:14388121438812147359934788Geodermatophilus obscurus DSM 43160, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002947:2809591*2809591283264923059Pseudomonas putida KT2440, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012660:4558122*4558122459234134220Pseudomonas fluorescens SBW25 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015683:1432995*1432995145632723333Corynebacterium ulcerans BR-AD22 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014329:1298644*1298644131713518492Corynebacterium pseudotuberculosis FRC41 chromosome, complete3e-0661.9BLASTN svgBLASTP svg