Query: NC_012490:2006716 Rhodococcus erythropolis PR4, complete genome
Start: 2006716, End: 2033986, Length: 27271
Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008268:5781604* | 5781604 | 5814244 | 32641 | Rhodococcus sp. RHA1, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_013595:7195764 | 7195764 | 7218947 | 23184 | Streptosporangium roseum DSM 43021, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_008268:2313583* | 2313583 | 2344488 | 30906 | Rhodococcus sp. RHA1, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010612:3745332* | 3745332 | 3781318 | 35987 | Mycobacterium marinum M, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_003155:3913789* | 3913789 | 3937489 | 23701 | Streptomyces avermitilis MA-4680, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_015711:6796082* | 6796082 | 6842172 | 46091 | Myxococcus fulvus HW-1 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_015711:6522808* | 6522808 | 6564735 | 41928 | Myxococcus fulvus HW-1 chromosome, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_007777:2841000 | 2841000 | 2903932 | 62933 | Frankia sp. CcI3, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_008278:2732890* | 2732890 | 2785591 | 52702 | Frankia alni ACN14a, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_008278:2772726* | 2772726 | 2803223 | 30498 | Frankia alni ACN14a, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_012522:2031786* | 2031786 | 2061572 | 29787 | Rhodococcus opacus B4, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_012522:5952307* | 5952307 | 5979710 | 27404 | Rhodococcus opacus B4, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015564:484994 | 484994 | 513148 | 28155 | Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_020126:3383902* | 3383902 | 3421387 | 37486 | Myxococcus stipitatus DSM 14675, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_013722:1816561* | 1816561 | 1865599 | 49039 | Xanthomonas albilineans, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_013722:1785692* | 1785692 | 1839192 | 53501 | Xanthomonas albilineans, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014659:4299552* | 4299552 | 4343310 | 43759 | Rhodococcus equi 103S, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |