Query: NC_011985:3892630 Agrobacterium radiobacter K84 chromosome 1, complete genome
Start: 3892630, End: 3924664, Length: 32035
Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_003065:27163 | 27163 | 69102 | 41940 | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence | 0 | 926 | BLASTN svg | BLASTP svg |
| NC_009667:2860818* | 2860818 | 2889999 | 29182 | Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence | 1e-46 | 196 | BLASTN svg | BLASTP svg |
| NC_003047:3360000 | 3360000 | 3418599 | 58600 | Sinorhizobium meliloti 1021, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
| NC_014034:2253649 | 2253649 | 2278675 | 25027 | Rhodobacter capsulatus SB1003 chromosome, complete genome | 5e-21 | 111 | BLASTN svg | BLASTP svg |
| NC_003317:1443874 | 1443874 | 1465651 | 21778 | Brucella melitensis 16M chromosome I, complete sequence | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_004310:508483* | 508483 | 534885 | 26403 | Brucella suis 1330 chromosome I, complete sequence | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_006932:531000* | 531000 | 557099 | 26100 | Brucella abortus biovar 1 str. 9-941 chromosome I, complete | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_007618:526400 | 526400 | 552796 | 26397 | Brucella melitensis biovar Abortus 2308 chromosome I, complete | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_010169:527500* | 527500 | 552871 | 25372 | Brucella suis ATCC 23445 chromosome I, complete sequence | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_010742:529500* | 529500 | 554817 | 25318 | Brucella abortus S19 chromosome 1, complete sequence | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_004463:1717890 | 1717890 | 1748152 | 30263 | Bradyrhizobium japonicum USDA 110, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_009668:46010 | 46010 | 65599 | 19590 | Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010505:1264758 | 1264758 | 1296728 | 31971 | Methylobacterium radiotolerans JCM 2831, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011982:206784 | 206784 | 231681 | 24898 | Agrobacterium vitis S4 plasmid pTiS4, complete sequence | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_008358:798390 | 798390 | 839343 | 40954 | Hyphomonas neptunium ATCC 15444, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_008209:3313087 | 3313087 | 3333112 | 20026 | Roseobacter denitrificans OCh 114, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015067:2136048 | 2136048 | 2168969 | 32922 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_009051:165102 | 165102 | 197636 | 32535 | Methanoculleus marisnigri JR1, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |