Query: NC_011896:3204579 Mycobacterium leprae Br4923, complete genome
Start: 3204579, End: 3232442, Length: 27864
Host Lineage: Mycobacterium leprae; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a human skin biopsy in Brazil, and passaged in nude mice and armadillos. The bacterium is a close relative of M. tuberculosis. However, compared to the latter, the genome of M. leprae is smaller due to reductive genome evolution, with many important metabolic activities including siderophore production, part of the oxidative chain, most of the microaerophilic and anaerobic respiratory chains, and numerous catabolic systems and their regulatory circuits eliminated due to extensive recombination events between dispersed repetitive sequences. It is evident that this species has undergone massive genome reduction over time as a result of its parasitic nature, discarding more than half its genes and rendering it the most striking example of genome reduction in a microbial pathogen.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_002677:3204710 | 3204710 | 3232573 | 27864 | Mycobacterium leprae TN, complete genome | 0 | 33330 | BLASTN svg | BLASTP svg |
NC_020133:142790 | 142790 | 167977 | 25188 | Mycobacterium liflandii 128FXT, complete genome | 0 | 1092 | BLASTN svg | BLASTP svg |
NC_011896:3040500 | 3040500 | 3062139 | 21640 | Mycobacterium leprae Br4923, complete genome | 2e-56 | 228 | BLASTN svg | BLASTP svg |
NC_002677:3040711 | 3040711 | 3060328 | 19618 | Mycobacterium leprae TN, complete genome | 2e-56 | 228 | BLASTN svg | BLASTP svg |
NC_013446:3209000 | 3209000 | 3230645 | 21646 | Comamonas testosteroni CNB-2, complete genome | 2e-53 | 218 | BLASTN svg | BLASTP svg |
NC_018681:9262000* | 9262000 | 9293653 | 31654 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 1e-45 | 192 | BLASTN svg | BLASTP svg |
NC_008340:1303607 | 1303607 | 1322156 | 18550 | Alkalilimnicola ehrlichei MLHE-1, complete genome | 4e-18 | 101 | BLASTN svg | BLASTP svg |
NC_012560:2906459* | 2906459 | 2928099 | 21641 | Azotobacter vinelandii DJ, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_021150:2906471* | 2906471 | 2928099 | 21629 | Azotobacter vinelandii CA6, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_002939:1601706* | 1601706 | 1621349 | 19644 | Geobacter sulfurreducens PCA, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_014355:781537 | 781537 | 807129 | 25593 | Candidatus Nitrospira defluvii, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013162:1130554 | 1130554 | 1150969 | 20416 | Capnocytophaga ochracea DSM 7271, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_002946:1020175 | 1020175 | 1064993 | 44819 | Neisseria gonorrhoeae FA 1090, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007517:1515493* | 1515493 | 1536760 | 21268 | Geobacter metallireducens GS-15, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013169:2045000 | 2045000 | 2065599 | 20600 | Kytococcus sedentarius DSM 20547, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008699:4922465* | 4922465 | 4948694 | 26230 | Nocardioides sp. JS614, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004369:2968251* | 2968251 | 3006844 | 38594 | Corynebacterium efficiens YS-314, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |