Pre_GI: BLASTN Hits

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Query: NC_011883:487187 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

Start: 487187, End: 510195, Length: 23009

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013173:36793263679326373266253337Desulfomicrobium baculatum DSM 4028, complete genome2e-53218BLASTN svgBLASTP svg
NC_011769:34013533401353342520623854Desulfovibrio vulgaris str. 'Miyazaki F', complete genome3e-49204BLASTN svgBLASTP svg
NC_002977:11984381198438121974121304Methylococcus capsulatus str. Bath, complete genome3e-43184BLASTN svgBLASTP svg
NC_013173:2884887*2884887293159946713Desulfomicrobium baculatum DSM 4028, complete genome1e-42182BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome9e-31143BLASTN svgBLASTP svg
NC_013959:2892660*2892660292827535616Sideroxydans lithotrophicus ES-1 chromosome, complete genome4e-30141BLASTN svgBLASTP svg
NC_011740:21351412135141215307917939Escherichia fergusonii ATCC 35469, complete genome9e-28133BLASTN svgBLASTP svg
NC_012691:22250002225000224630921310Tolumonas auensis DSM 9187, complete genome1e-20109BLASTN svgBLASTP svg
NC_007761:781210*78121081014728938Rhizobium etli CFN 42, complete genome5e-20107BLASTN svgBLASTP svg
NC_007484:16718351671835169794126107Nitrosococcus oceani ATCC 19707, complete genome3e-18101BLASTN svgBLASTP svg
NC_008702:39280433928043395047222430Azoarcus sp. BH72, complete genome3e-18101BLASTN svgBLASTP svg
NC_008781:3365468*3365468340127235805Polaromonas naphthalenivorans CJ2, complete genome3e-18101BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_005070:41926141926147386554605Synechococcus sp. WH 8102, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_020211:17045001704500175039445895Serratia marcescens WW4, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008319:13686313686316274425882Synechococcus sp. CC9311, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_013960:13193491319349133917819830Nitrosococcus halophilus Nc4 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014394:13736021373602140662533024Gallionella capsiferriformans ES-2 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014972:54414654414658609941954Desulfobulbus propionicus DSM 2032 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015138:10160001016000103760521606Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_011901:2202690*2202690223230229613Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_010524:67421667421670822934014Leptothrix cholodnii SP-6, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014121:33996853399685343519435510Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete7e-1383.8BLASTN svgBLASTP svg
NC_007517:1468719*1468719150798939271Geobacter metallireducens GS-15, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007498:20878112087811212235934549Pelobacter carbinolicus DSM 2380, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010524:25308412530841255411423274Leptothrix cholodnii SP-6, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011146:1293202*1293202131298219781Geobacter bemidjiensis Bem, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014500:4257145*4257145428370126557Dickeya dadantii 3937 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007908:1328832*1328832136532136490Rhodoferax ferrireducens T118, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome5e-1177.8BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome2e-1075.8BLASTN svgBLASTP svg
CP002185:22337322233732226508731356Escherichia coli W, complete genome2e-1075.8BLASTN svgBLASTP svg
CP002516:18464921846492187615129660Escherichia coli KO11, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007514:90456590456594230337739Chlorobium chlorochromatii CaD3, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011750:10349191034919106622831310Escherichia coli IAI39 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013716:22551022255102228502629925Citrobacter rodentium ICC168, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015566:16592881659288170119441907Serratia sp. AS12 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015567:16604621660462170120640745Serratia sp. AS9 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008268:5781604*5781604581424432641Rhodococcus sp. RHA1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008639:2968000*2968000302586557866Chlorobium phaeobacteroides DSM 266, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007489:42500425006678724288Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_013222:72138472138474880827425Robiginitalea biformata HTCC2501, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010067:80712980712983359926471Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete4e-0867.9BLASTN svgBLASTP svg
NC_006905:21753612175361220410628746Salmonella enterica subsp. enterica serovar Choleraesuis str4e-0867.9BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome4e-0867.9BLASTN svgBLASTP svg
CU928145:23244952324495235493330439Escherichia coli 55989 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005027:13048871304887132660221716Rhodopirellula baltica SH 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011748:23244952324495235493330439Escherichia coli 55989, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003901:77550077550079775722258Methanosarcina mazei Go1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011979:2352961*2352961238357030610Geobacter sp. FRC-32, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013194:963735963735100191838184Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete7e-0763.9BLASTN svgBLASTP svg
NC_013850:16580101658010169680438795Klebsiella variicola At-22 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014963:55800055800058218424185Terriglobus saanensis SP1PR4 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018679:40284124028412404756319152Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete7e-0763.9BLASTN svgBLASTP svg
NC_018876:2277160*2277160229993322774Methanolobus psychrophilus R15 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015976:10648881064888109285227965Sphingobium sp. SYK-6, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013223:44834344834347816129819Desulfohalobium retbaense DSM 5692, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009937:53082530827690623825Azorhizobium caulinodans ORS 571, complete genome3e-0661.9BLASTN svgBLASTP svg