Pre_GI: BLASTN Hits

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Query: NC_011770:3163480 Pseudomonas aeruginosa LESB58, complete genome

Start: 3163480, End: 3199820, Length: 36341

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021150:2546000*2546000257243726438Azotobacter vinelandii CA6, complete genome6e-67264BLASTN svgBLASTP svg
NC_012560:2546000*2546000257242526426Azotobacter vinelandii DJ, complete genome6e-67264BLASTN svgBLASTP svg
NC_015711:6266432*6266432630778741356Myxococcus fulvus HW-1 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_002947:48050604805060483118826129Pseudomonas putida KT2440, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_008752:4086283*4086283411381327531Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015711:6796082*6796082684217246091Myxococcus fulvus HW-1 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015690:44697754469775455660686832Paenibacillus mucilaginosus KNP414 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015138:41034574103457412794224486Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete7e-1177.8BLASTN svgBLASTP svg
NC_013722:1785692*1785692183919253501Xanthomonas albilineans, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013722:1816561*1816561186559949039Xanthomonas albilineans, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014722:1971305*1971305199935928055Burkholderia rhizoxinica HKI 454, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014623:5942918*5942918597391931002Stigmatella aurantiaca DW4/3-1 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_020126:55586135558613560639247780Myxococcus stipitatus DSM 14675, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008095:5585346*5585346562741242067Myxococcus xanthus DK 1622, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010581:93779393779396390726115Beijerinckia indica subsp. indica ATCC 9039, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013722:850307*85030787951329207Xanthomonas albilineans, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012997:2517130*2517130254093523806Teredinibacter turnerae T7901, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_007777:28410002841000290393262933Frankia sp. CcI3, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008095:4858117*4858117490039542279Myxococcus xanthus DK 1622, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013595:71957647195764721894723184Streptosporangium roseum DSM 43021, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014623:50299325029932508446054529Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010125:2884762*2884762294559960838Gluconacetobacter diazotrophicus PAl 5, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014483:23345002334500236409929600Paenibacillus polymyxa E681 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_019673:6298342*6298342632793229591Saccharothrix espanaensis DSM 44229 complete genome1e-0663.9BLASTN svgBLASTP svg
NC_020126:4517133*4517133455758540453Myxococcus stipitatus DSM 14675, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014623:6150028*6150028618651836491Stigmatella aurantiaca DW4/3-1 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010162:95024809502480953339230913Sorangium cellulosum 'So ce 56', complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005126:36304593630459368847858020Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome4e-0661.9BLASTN svgBLASTP svg