Query: NC_011770:3163480 Pseudomonas aeruginosa LESB58, complete genome
Start: 3163480, End: 3199820, Length: 36341
Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_021150:2546000* | 2546000 | 2572437 | 26438 | Azotobacter vinelandii CA6, complete genome | 6e-67 | 264 | BLASTN svg | BLASTP svg |
NC_012560:2546000* | 2546000 | 2572425 | 26426 | Azotobacter vinelandii DJ, complete genome | 6e-67 | 264 | BLASTN svg | BLASTP svg |
NC_015711:6266432* | 6266432 | 6307787 | 41356 | Myxococcus fulvus HW-1 chromosome, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_007005:2191500* | 2191500 | 2230781 | 39282 | Pseudomonas syringae pv. syringae B728a, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_002947:4805060 | 4805060 | 4831188 | 26129 | Pseudomonas putida KT2440, complete genome | 5e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_008752:4086283* | 4086283 | 4113813 | 27531 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015711:6796082* | 6796082 | 6842172 | 46091 | Myxococcus fulvus HW-1 chromosome, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_015690:4469775 | 4469775 | 4556606 | 86832 | Paenibacillus mucilaginosus KNP414 chromosome, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_015138:4103457 | 4103457 | 4127942 | 24486 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013722:1785692* | 1785692 | 1839192 | 53501 | Xanthomonas albilineans, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013722:1816561* | 1816561 | 1865599 | 49039 | Xanthomonas albilineans, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_020453:1084238 | 1084238 | 1144897 | 60660 | Agromonas oligotrophica S58 DNA, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_020453:1072979 | 1072979 | 1120471 | 47493 | Agromonas oligotrophica S58 DNA, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_014722:1971305* | 1971305 | 1999359 | 28055 | Burkholderia rhizoxinica HKI 454, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_014623:5942918* | 5942918 | 5973919 | 31002 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_007005:4411388 | 4411388 | 4446430 | 35043 | Pseudomonas syringae pv. syringae B728a, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_020126:5558613 | 5558613 | 5606392 | 47780 | Myxococcus stipitatus DSM 14675, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008095:5585346* | 5585346 | 5627412 | 42067 | Myxococcus xanthus DK 1622, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010581:937793 | 937793 | 963907 | 26115 | Beijerinckia indica subsp. indica ATCC 9039, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_013722:850307* | 850307 | 879513 | 29207 | Xanthomonas albilineans, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014500:1862000* | 1862000 | 1917268 | 55269 | Dickeya dadantii 3937 chromosome, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_012997:2517130* | 2517130 | 2540935 | 23806 | Teredinibacter turnerae T7901, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007651:2639553* | 2639553 | 2691724 | 52172 | Burkholderia thailandensis E264 chromosome I, complete sequence | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007777:2841000 | 2841000 | 2903932 | 62933 | Frankia sp. CcI3, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008095:4189082* | 4189082 | 4234097 | 45016 | Myxococcus xanthus DK 1622, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008095:4858117* | 4858117 | 4900395 | 42279 | Myxococcus xanthus DK 1622, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013595:7195764 | 7195764 | 7218947 | 23184 | Streptosporangium roseum DSM 43021, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014623:5029932 | 5029932 | 5084460 | 54529 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015957:6119346 | 6119346 | 6195900 | 76555 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010125:2884762* | 2884762 | 2945599 | 60838 | Gluconacetobacter diazotrophicus PAl 5, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_014483:2334500 | 2334500 | 2364099 | 29600 | Paenibacillus polymyxa E681 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_019673:6298342* | 6298342 | 6327932 | 29591 | Saccharothrix espanaensis DSM 44229 complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_020126:4517133* | 4517133 | 4557585 | 40453 | Myxococcus stipitatus DSM 14675, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_014623:6150028* | 6150028 | 6186518 | 36491 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010162:9502480 | 9502480 | 9533392 | 30913 | Sorangium cellulosum 'So ce 56', complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_005126:3630459 | 3630459 | 3688478 | 58020 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003155:3913789* | 3913789 | 3937489 | 23701 | Streptomyces avermitilis MA-4680, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |