Pre_GI: BLASTN Hits

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Query: NC_011770:1431740 Pseudomonas aeruginosa LESB58, complete genome

Start: 1431740, End: 1453938, Length: 22199

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011770:2690501*2690501273396743467Pseudomonas aeruginosa LESB58, complete genome014800BLASTN svgBLASTP svg
NC_011770:860944*86094490509944156Pseudomonas aeruginosa LESB58, complete genome01982BLASTN svgBLASTP svg
NC_007650:11923101192310122299130682Burkholderia thailandensis E264 chromosome II, complete sequence2e-25125BLASTN svgBLASTP svg
NC_007434:1712000*1712000180122589226Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-25125BLASTN svgBLASTP svg
NC_007645:53975265397526543363336108Hahella chejuensis KCTC 2396, complete genome2e-22115BLASTN svgBLASTP svg
NC_008752:58588458588461104025157Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015856:3170771*3170771319449023720Collimonas fungivorans Ter331 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010501:30131033013103303609922997Pseudomonas putida W619, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_012660:31165003116500314096024461Pseudomonas fluorescens SBW25 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013446:30344863034486305883724352Comamonas testosteroni CNB-2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004129:43683564368356438728118926Pseudomonas fluorescens Pf-5, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome3e-0661.9BLASTN svgBLASTP svg