Query: NC_011769:3434744 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome
Start: 3434744, End: 3463682, Length: 28939
Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria
General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_007519:2773000 | 2773000 | 2805517 | 32518 | Desulfovibrio alaskensis G20 chromosome, complete genome | 3e-93 | 351 | BLASTN svg | BLASTP svg |
NC_014844:903877* | 903877 | 926431 | 22555 | Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome | 3e-71 | 278 | BLASTN svg | BLASTP svg |
NC_015859:1099919* | 1099919 | 1133504 | 33586 | Corynebacterium variabile DSM 44702 chromosome, complete genome | 2e-20 | 109 | BLASTN svg | BLASTP svg |
NC_014365:2888897* | 2888897 | 2912469 | 23573 | Desulfarculus baarsii DSM 2075 chromosome, complete genome | 4e-18 | 101 | BLASTN svg | BLASTP svg |
NC_006361:1547034* | 1547034 | 1576759 | 29726 | Nocardia farcinica IFM 10152, complete genome | 4e-18 | 101 | BLASTN svg | BLASTP svg |
NC_007761:241900* | 241900 | 262635 | 20736 | Rhizobium etli CFN 42, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_006177:520055 | 520055 | 540538 | 20484 | Symbiobacterium thermophilum IAM 14863, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_002696:1154996* | 1154996 | 1177186 | 22191 | Caulobacter crescentus CB15, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_003197:2720726 | 2720726 | 2740794 | 20069 | Salmonella typhimurium LT2, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_011080:2722492 | 2722492 | 2742171 | 19680 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_011769:2248902 | 2248902 | 2275660 | 26759 | Desulfovibrio vulgaris str. 'Miyazaki F', complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014972:1923035 | 1923035 | 1943502 | 20468 | Desulfobulbus propionicus DSM 2032 chromosome, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_006677:215466* | 215466 | 257307 | 41842 | Gluconobacter oxydans 621H, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015873:2105847 | 2105847 | 2141084 | 35238 | Megasphaera elsdenii DSM 20460, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_015138:322386 | 322386 | 341722 | 19337 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011959:815601* | 815601 | 836122 | 20522 | Thermomicrobium roseum DSM 5159, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_005071:288922* | 288922 | 341341 | 52420 | Prochlorococcus marinus str. MIT 9313, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012560:1322000 | 1322000 | 1357145 | 35146 | Azotobacter vinelandii DJ, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_021150:1322000 | 1322000 | 1357157 | 35158 | Azotobacter vinelandii CA6, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013216:3408608* | 3408608 | 3433785 | 25178 | Desulfotomaculum acetoxidans DSM 771, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_012912:1229333 | 1229333 | 1252801 | 23469 | Dickeya zeae Ech1591, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010505:5525461 | 5525461 | 5572278 | 46818 | Methylobacterium radiotolerans JCM 2831, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_007760:4143301 | 4143301 | 4163447 | 20147 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008609:251608 | 251608 | 288929 | 37322 | Pelobacter propionicus DSM 2379, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011146:4196652 | 4196652 | 4218361 | 21710 | Geobacter bemidjiensis Bem, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011891:4169796 | 4169796 | 4192296 | 22501 | Anaeromyxobacter dehalogenans 2CP-1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014844:1270618* | 1270618 | 1324863 | 54246 | Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010814:155834* | 155834 | 180643 | 24810 | Geobacter lovleyi SZ, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_011146:2485625 | 2485625 | 2507035 | 21411 | Geobacter bemidjiensis Bem, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014935:1223817* | 1223817 | 1266099 | 42283 | Nitratifractor saLSUginis DSM 16511 chromosome, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015671:874500* | 874500 | 899423 | 24924 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_016027:2387832* | 2387832 | 2410099 | 22268 | Gluconacetobacter xylinus NBRC 3288, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015711:346436 | 346436 | 365285 | 18850 | Myxococcus fulvus HW-1 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008786:3681847 | 3681847 | 3700925 | 19079 | Verminephrobacter eiseniae EF01-2, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007517:3430237* | 3430237 | 3470683 | 40447 | Geobacter metallireducens GS-15, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |