Pre_GI: BLASTN Hits

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Query: NC_011769:3434744 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 3434744, End: 3463682, Length: 28939

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007519:27730002773000280551732518Desulfovibrio alaskensis G20 chromosome, complete genome3e-93351BLASTN svgBLASTP svg
NC_014844:903877*90387792643122555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome3e-71278BLASTN svgBLASTP svg
NC_015859:1099919*1099919113350433586Corynebacterium variabile DSM 44702 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_014365:2888897*2888897291246923573Desulfarculus baarsii DSM 2075 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_006361:1547034*1547034157675929726Nocardia farcinica IFM 10152, complete genome4e-18101BLASTN svgBLASTP svg
NC_007761:241900*24190026263520736Rhizobium etli CFN 42, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_006177:52005552005554053820484Symbiobacterium thermophilum IAM 14863, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002696:1154996*1154996117718622191Caulobacter crescentus CB15, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-1487.7BLASTN svgBLASTP svg
NC_011769:22489022248902227566026759Desulfovibrio vulgaris str. 'Miyazaki F', complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014972:19230351923035194350220468Desulfobulbus propionicus DSM 2032 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_006677:215466*21546625730741842Gluconobacter oxydans 621H, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015873:21058472105847214108435238Megasphaera elsdenii DSM 20460, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015138:32238632238634172219337Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_011959:815601*81560183612220522Thermomicrobium roseum DSM 5159, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005071:288922*28892234134152420Prochlorococcus marinus str. MIT 9313, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012560:13220001322000135714535146Azotobacter vinelandii DJ, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_021150:13220001322000135715735158Azotobacter vinelandii CA6, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013216:3408608*3408608343378525178Desulfotomaculum acetoxidans DSM 771, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012912:12293331229333125280123469Dickeya zeae Ech1591, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010505:55254615525461557227846818Methylobacterium radiotolerans JCM 2831, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007760:41433014143301416344720147Anaeromyxobacter dehalogenans 2CP-C, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008609:25160825160828892937322Pelobacter propionicus DSM 2379, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011146:41966524196652421836121710Geobacter bemidjiensis Bem, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011891:41697964169796419229622501Anaeromyxobacter dehalogenans 2CP-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014844:1270618*1270618132486354246Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010814:155834*15583418064324810Geobacter lovleyi SZ, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_011146:24856252485625250703521411Geobacter bemidjiensis Bem, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014935:1223817*1223817126609942283Nitratifractor saLSUginis DSM 16511 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015671:874500*87450089942324924Cellvibrio gilvus ATCC 13127 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_016027:2387832*2387832241009922268Gluconacetobacter xylinus NBRC 3288, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015711:34643634643636528518850Myxococcus fulvus HW-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008786:36818473681847370092519079Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007517:3430237*3430237347068340447Geobacter metallireducens GS-15, complete genome3e-0661.9BLASTN svgBLASTP svg