Pre_GI: BLASTN Hits

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Query: NC_011593:2372362 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 2372362, End: 2394770, Length: 22409

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004369:43759443759445872021127Corynebacterium efficiens YS-314, complete genome3e-24121BLASTN svgBLASTP svg
NC_014246:876000*87600089916923170Mobiluncus curtisii ATCC 43063 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_021177:3598700*3598700361863819939Streptomyces fulvissimus DSM 40593, complete genome3e-21111BLASTN svgBLASTP svg
NC_018750:3661243*3661243368475823516Streptomyces venezuelae ATCC 10712, complete genome3e-21111BLASTN svgBLASTP svg
NC_010572:3925803*3925803395628730485Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-21111BLASTN svgBLASTP svg
NC_015957:10403997*104039971042720123205Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_003888:46130004613000463146518466Streptomyces coelicolor A3(2), complete genome5e-20107BLASTN svgBLASTP svg
NC_006087:345976*34597640567959704Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-18101BLASTN svgBLASTP svg
NC_007777:5087405*5087405511177224368Frankia sp. CcI3, complete genome3e-18101BLASTN svgBLASTP svg
NC_008146:5106775*5106775513109924325Mycobacterium sp. MCS, complete genome3e-18101BLASTN svgBLASTP svg
NC_008705:5144433*5144433517009925667Mycobacterium sp. KMS, complete genome3e-18101BLASTN svgBLASTP svg
NC_008711:3701635*3701635372498023346Arthrobacter aurescens TC1, complete genome3e-18101BLASTN svgBLASTP svg
NC_019673:359540*35954038271523176Saccharothrix espanaensis DSM 44229 complete genome3e-18101BLASTN svgBLASTP svg
NC_013530:3365742*3365742338937923638Xylanimonas cellulosilytica DSM 15894, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_015588:2939747*2939747296269722951Isoptericola variabilis 225 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_020302:2677617*2677617270009922483Corynebacterium halotolerans YIM 70093 = DSM 44683, complete7e-1693.7BLASTN svgBLASTP svg
NC_007413:1405817*1405817142811722301Anabaena variabilis ATCC 29413, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007513:1900000*1900000192383823839Synechococcus sp. CC9902, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013131:10413240*104132401043185718618Catenulispora acidiphila DSM 44928, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013947:613774*61377463382720054Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_006177:2943259*2943259296594222684Symbiobacterium thermophilum IAM 14863, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_005085:1096000*1096000111962323624Chromobacterium violaceum ATCC 12472, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007503:1680513*1680513170243021918Carboxydothermus hydrogenoformans Z-2901, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015738:838715*83871586430625592Eggerthella sp. YY7918, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018868:1352000*1352000138222930230Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014153:436082*43608245651520434Thiomonas intermedia K12 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013203:472679*47267949599223314Atopobium parvulum DSM 20469, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008148:2290806*2290806231729826493Rubrobacter xylanophilus DSM 9941, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014657:673500*67350069431420815Caldicellulosiruptor owensensis OL chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg