Pre_GI: BLASTN Hits

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Query: NC_011004:1174813 Rhodopseudomonas palustris TIE-1, complete genome

Start: 1174813, End: 1198110, Length: 23298

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007964:32882532882536913940315Nitrobacter hamburgensis X14, complete genome1e-107398BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome2e-106394BLASTN svgBLASTP svg
NC_011004:2507566*2507566253137523810Rhodopseudomonas palustris TIE-1, complete genome4e-79303BLASTN svgBLASTP svg
NC_015684:31579413157941318409926159Oligotropha carboxidovorans OM5 chromosome, complete genome2e-75291BLASTN svgBLASTP svg
NC_011386:93114093114096230731168Oligotropha carboxidovorans OM5, complete genome2e-75291BLASTN svgBLASTP svg
NC_007958:2423335*2423335244565022316Rhodopseudomonas palustris BisB5, complete genome3e-74287BLASTN svgBLASTP svg
NC_011987:36299736299739049927503Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence6e-72280BLASTN svgBLASTP svg
NC_011894:6418000*6418000644309925100Methylobacterium nodulans ORS 2060, complete genome6e-69270BLASTN svgBLASTP svg
NC_011894:43605774360577439709936523Methylobacterium nodulans ORS 2060, complete genome6e-69270BLASTN svgBLASTP svg
NC_011892:779757797512040642432Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete6e-69270BLASTN svgBLASTP svg
NC_019973:58695005869500589538625887Mesorhizobium australicum WSM2073, complete genome9e-68266BLASTN svgBLASTP svg
NC_015675:64934446493444653829644853Mesorhizobium opportunistum WSM2075 chromosome, complete genome9e-68266BLASTN svgBLASTP svg
NC_014923:59405005940500596642625927Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete9e-68266BLASTN svgBLASTP svg
NC_012808:19790001979000199740518406Methylobacterium extorquens AM1, complete genome2e-65258BLASTN svgBLASTP svg
NC_010505:12647581264758129672831971Methylobacterium radiotolerans JCM 2831, complete genome2e-62248BLASTN svgBLASTP svg
NC_010338:4530403*4530403455419223790Caulobacter sp. K31, complete genome1e-51212BLASTN svgBLASTP svg
NC_010338:2443765*2443765246613122367Caulobacter sp. K31, complete genome1e-51212BLASTN svgBLASTP svg
NC_010338:58800058800061124723248Caulobacter sp. K31, complete genome7e-47196BLASTN svgBLASTP svg
NC_004463:17178901717890174815230263Bradyrhizobium japonicum USDA 110, complete genome6e-35157BLASTN svgBLASTP svg
NC_007958:23706192370619240281732199Rhodopseudomonas palustris BisB5, complete genome4e-30141BLASTN svgBLASTP svg
NC_011004:24577782457778249046532688Rhodopseudomonas palustris TIE-1, complete genome4e-30141BLASTN svgBLASTP svg
NC_015186:491930*49193052445732528Acidiphilium multivorum AIU301, complete genome3e-24121BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome5e-23117BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome1e-20109BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome3e-18101BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011662:1160887*1160887119009929213Thauera sp. MZ1T, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-1693.7BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-1693.7BLASTN svgBLASTP svg
NC_014819:25765257655121725453Asticcacaulis excentricus CB 48 plasmid pASTEX02, complete3e-1591.7BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_014153:16635971663597168818424588Thiomonas intermedia K12 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012856:10800001080000110535625357Ralstonia pickettii 12D chromosome 1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_011987:53760537608309929340Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence7e-1383.8BLASTN svgBLASTP svg
NC_008060:3155133*3155133320509949967Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_013446:41828784182878420121918342Comamonas testosteroni CNB-2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013446:2237854*2237854227259934746Comamonas testosteroni CNB-2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013446:21649742164974219310328130Comamonas testosteroni CNB-2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013446:1724000*1724000175930835309Comamonas testosteroni CNB-2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012724:25475002547500258413336634Burkholderia glumae BGR1 chromosome 1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012724:359444*35944438978130338Burkholderia glumae BGR1 chromosome 1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015383:22903622903624724318208Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_012811:31730831730834221324906Methylobacterium extorquens AM1 megaplasmid, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_007925:10855001085500111052825029Rhodopseudomonas palustris BisB18, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014664:15609261560926158164220717Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014923:57656605765660578509919440Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete7e-0763.9BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014034:22536492253649227867525027Rhodobacter capsulatus SB1003 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007973:49960649960652396824363Ralstonia metallidurans CH34 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg