Pre_GI: BLASTN Hits

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Query: NC_010612:3813481 Mycobacterium marinum M, complete genome

Start: 3813481, End: 3841145, Length: 27665

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome02656BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome02656BLASTN svgBLASTP svg
NC_010397:20635612063561208701523455Mycobacterium abscessus chromosome Chromosome, complete sequence02650BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome02648BLASTN svgBLASTP svg
NC_010612:90890*9089011475023861Mycobacterium marinum M, complete genome02458BLASTN svgBLASTP svg
NC_010612:5626259*5626259564509918841Mycobacterium marinum M, complete genome02458BLASTN svgBLASTP svg
NC_008595:39144633914463393559921137Mycobacterium avium 104, complete genome01362BLASTN svgBLASTP svg
NC_008146:34017433401743342510723365Mycobacterium sp. MCS, complete genome0662BLASTN svgBLASTP svg
NC_008705:34308393430839345338922551Mycobacterium sp. KMS, complete genome0662BLASTN svgBLASTP svg
NC_009077:33763513376351339892622576Mycobacterium sp. JLS, complete genome0662BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-34155BLASTN svgBLASTP svg
NC_013169:80512480512482366418541Kytococcus sedentarius DSM 20547, complete genome3e-28135BLASTN svgBLASTP svg
NC_013169:1759900*1759900178341323514Kytococcus sedentarius DSM 20547, complete genome3e-28135BLASTN svgBLASTP svg
NC_014215:34991734991737916229246Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-24121BLASTN svgBLASTP svg
NC_014215:42168342168345090929227Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-24121BLASTN svgBLASTP svg
NC_014215:49285549285551339920545Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-24121BLASTN svgBLASTP svg
NC_014550:32637833263783328159917817Arthrobacter arilaitensis Re117, complete genome3e-22115BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_018583:953889538813461139224Gordonia sp. KTR9 plasmid pGKT3, complete sequence1e-18103BLASTN svgBLASTP svg
NC_008699:37755613775561380004924489Nocardioides sp. JS614, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_009077:48103794810379483961029232Mycobacterium sp. JLS, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008595:17923181792318181084718530Mycobacterium avium 104, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_018581:33235003323500334596822469Gordonia sp. KTR9 chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_018691:22545662254566228373829173Alcanivorax dieselolei B5 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015953:3782302*3782302381186629565Streptomyces sp. SirexAA-E chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_013441:50254445025444505059925156Gordonia bronchialis DSM 43247, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_021177:4124839*4124839415343928601Streptomyces fulvissimus DSM 40593, complete genome3e-0661.9BLASTN svgBLASTP svg