Pre_GI: BLASTN Hits

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Query: NC_010612:1005778 Mycobacterium marinum M, complete genome

Start: 1005778, End: 1038805, Length: 33028

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020133:942375*94237596559923225Mycobacterium liflandii 128FXT, complete genome012480BLASTN svgBLASTP svg
NC_020133:3787844*3787844381646528622Mycobacterium liflandii 128FXT, complete genome04662BLASTN svgBLASTP svg
NC_010612:3969244*3969244401404344800Mycobacterium marinum M, complete genome03620BLASTN svgBLASTP svg
NC_002944:4446083*4446083446762321541Mycobacterium avium subsp. paratuberculosis K-10, complete genome01409BLASTN svgBLASTP svg
NC_010612:90890*9089011475023861Mycobacterium marinum M, complete genome1e-30143BLASTN svgBLASTP svg
NC_010612:103081*10308113565632576Mycobacterium marinum M, complete genome1e-30143BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-28135BLASTN svgBLASTP svg
NC_010612:3745332*3745332378131835987Mycobacterium marinum M, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008596:421882*42188246586743986Mycobacterium smegmatis str. MC2 155, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010397:4150596*4150596418195931364Mycobacterium abscessus chromosome Chromosome, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_007777:28410002841000290393262933Frankia sp. CcI3, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008268:2313583*2313583234448830906Rhodococcus sp. RHA1, complete genome1e-0663.9BLASTN svgBLASTP svg