Query: NC_010519:1802294 Haemophilus somnus 2336 chromosome, complete genome
Start: 1802294, End: 1829253, Length: 26960
Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria
General Information: This strain was isolated from the lung of a calf which had pneumonia. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008309:1200245* | 1200245 | 1218599 | 18355 | Haemophilus somnus 129PT, complete genome | 0 | 4956 | BLASTN svg | BLASTP svg |
NC_008309:842072 | 842072 | 869315 | 27244 | Haemophilus somnus 129PT, complete genome | 0 | 658 | BLASTN svg | BLASTP svg |
NC_013416:1783349* | 1783349 | 1808201 | 24853 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 2e-134 | 488 | BLASTN svg | BLASTP svg |
NC_008309:385592 | 385592 | 409099 | 23508 | Haemophilus somnus 129PT, complete genome | 4e-126 | 460 | BLASTN svg | BLASTP svg |
NC_015964:1389628* | 1389628 | 1409190 | 19563 | Haemophilus parainfluenzae T3T1, complete genome | 5e-122 | 446 | BLASTN svg | BLASTP svg |
NC_008309:1827809 | 1827809 | 1851140 | 23332 | Haemophilus somnus 129PT, complete genome | 8e-112 | 412 | BLASTN svg | BLASTP svg |
NC_008309:190550 | 190550 | 222599 | 32050 | Haemophilus somnus 129PT, complete genome | 9e-87 | 329 | BLASTN svg | BLASTP svg |
NC_008309:1155218 | 1155218 | 1178249 | 23032 | Haemophilus somnus 129PT, complete genome | 3e-62 | 248 | BLASTN svg | BLASTP svg |
NC_012913:167034 | 167034 | 191780 | 24747 | Aggregatibacter aphrophilus NJ8700, complete genome | 1e-61 | 246 | BLASTN svg | BLASTP svg |
NC_008309:1851189* | 1851189 | 1879447 | 28259 | Haemophilus somnus 129PT, complete genome | 2e-57 | 232 | BLASTN svg | BLASTP svg |
NC_013416:668152* | 668152 | 698685 | 30534 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 9e-53 | 216 | BLASTN svg | BLASTP svg |
NC_009053:393700* | 393700 | 419642 | 25943 | Actinobacillus pleuropneumoniae L20, complete genome | 9e-53 | 216 | BLASTN svg | BLASTP svg |
NC_010939:405477* | 405477 | 447424 | 41948 | Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete | 1e-51 | 212 | BLASTN svg | BLASTP svg |
NC_013416:875758* | 875758 | 901099 | 25342 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 7e-32 | 147 | BLASTN svg | BLASTP svg |
NC_008309:502983* | 502983 | 529268 | 26286 | Haemophilus somnus 129PT, complete genome | 3e-25 | 125 | BLASTN svg | BLASTP svg |
NC_002505:1507860 | 1507860 | 1528843 | 20984 | Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010939:1986263* | 1986263 | 2028567 | 42305 | Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007484:1823751* | 1823751 | 1867946 | 44196 | Nitrosococcus oceani ATCC 19707, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008344:49039* | 49039 | 134599 | 85561 | Nitrosomonas eutropha C91, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |