Query: NC_010519:1411347 Haemophilus somnus 2336 chromosome, complete genome
Start: 1411347, End: 1431222, Length: 19876
Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria
General Information: This strain was isolated from the lung of a calf which had pneumonia. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008309:842072 | 842072 | 869315 | 27244 | Haemophilus somnus 129PT, complete genome | 0 | 3550 | BLASTN svg | BLASTP svg |
| NC_008309:1827809 | 1827809 | 1851140 | 23332 | Haemophilus somnus 129PT, complete genome | 0 | 749 | BLASTN svg | BLASTP svg |
| NC_008309:190550 | 190550 | 222599 | 32050 | Haemophilus somnus 129PT, complete genome | 1e-128 | 468 | BLASTN svg | BLASTP svg |
| NC_008309:1155218 | 1155218 | 1178249 | 23032 | Haemophilus somnus 129PT, complete genome | 1e-60 | 242 | BLASTN svg | BLASTP svg |
| NC_008309:1200245* | 1200245 | 1218599 | 18355 | Haemophilus somnus 129PT, complete genome | 7e-59 | 236 | BLASTN svg | BLASTP svg |
| NC_008309:1851189* | 1851189 | 1879447 | 28259 | Haemophilus somnus 129PT, complete genome | 4e-54 | 220 | BLASTN svg | BLASTP svg |
| NC_008309:1289370 | 1289370 | 1314906 | 25537 | Haemophilus somnus 129PT, complete genome | 2e-53 | 218 | BLASTN svg | BLASTP svg |
| NC_008309:385592 | 385592 | 409099 | 23508 | Haemophilus somnus 129PT, complete genome | 1e-51 | 212 | BLASTN svg | BLASTP svg |
| NC_009465:29735* | 29735 | 86099 | 56365 | Candidatus Vesicomyosocius okutanii HA, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
| NC_008309:502983* | 502983 | 529268 | 26286 | Haemophilus somnus 129PT, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
| NC_015460:418826 | 418826 | 440219 | 21394 | Gallibacterium anatis UMN179 chromosome, complete genome | 7e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_010531:428000* | 428000 | 450885 | 22886 | Polynucleobacter necessarius STIR1, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_004061:237205* | 237205 | 260677 | 23473 | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_015703:1898159* | 1898159 | 1932549 | 34391 | Runella slithyformis DSM 19594 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014774:239865* | 239865 | 259134 | 19270 | Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_012779:1286500 | 1286500 | 1324599 | 38100 | Edwardsiella ictaluri 93-146, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_004545:229771* | 229771 | 252099 | 22329 | Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008260:1044440* | 1044440 | 1062651 | 18212 | Alcanivorax borkumensis SK2, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_007954:3171081* | 3171081 | 3211599 | 40519 | Shewanella denitrificans OS217, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013508:1289159* | 1289159 | 1333922 | 44764 | Edwardsiella tarda EIB202, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_019757:1789237* | 1789237 | 1812370 | 23134 | Cylindrospermum stagnale PCC 7417, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014012:1421979* | 1421979 | 1444867 | 22889 | Shewanella violacea DSS12, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_013515:416760* | 416760 | 435638 | 18879 | Streptobacillus moniliformis DSM 12112, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_009832:1719149 | 1719149 | 1757986 | 38838 | Serratia proteamaculans 568, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |