Pre_GI: BLASTN Hits

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Query: NC_010519:1411347 Haemophilus somnus 2336 chromosome, complete genome

Start: 1411347, End: 1431222, Length: 19876

Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain was isolated from the lung of a calf which had pneumonia. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008309:84207284207286931527244Haemophilus somnus 129PT, complete genome03550BLASTN svgBLASTP svg
NC_008309:18278091827809185114023332Haemophilus somnus 129PT, complete genome0749BLASTN svgBLASTP svg
NC_008309:19055019055022259932050Haemophilus somnus 129PT, complete genome1e-128468BLASTN svgBLASTP svg
NC_008309:11552181155218117824923032Haemophilus somnus 129PT, complete genome1e-60242BLASTN svgBLASTP svg
NC_008309:1200245*1200245121859918355Haemophilus somnus 129PT, complete genome7e-59236BLASTN svgBLASTP svg
NC_008309:1851189*1851189187944728259Haemophilus somnus 129PT, complete genome4e-54220BLASTN svgBLASTP svg
NC_008309:12893701289370131490625537Haemophilus somnus 129PT, complete genome2e-53218BLASTN svgBLASTP svg
NC_008309:38559238559240909923508Haemophilus somnus 129PT, complete genome1e-51212BLASTN svgBLASTP svg
NC_009465:29735*297358609956365Candidatus Vesicomyosocius okutanii HA, complete genome2e-31145BLASTN svgBLASTP svg
NC_008309:502983*50298352926826286Haemophilus somnus 129PT, complete genome1e-26129BLASTN svgBLASTP svg
NC_015460:41882641882644021921394Gallibacterium anatis UMN179 chromosome, complete genome7e-22113BLASTN svgBLASTP svg
NC_010531:428000*42800045088522886Polynucleobacter necessarius STIR1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_004061:237205*23720526067723473Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015703:1898159*1898159193254934391Runella slithyformis DSM 19594 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014774:239865*23986525913419270Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004545:229771*22977125209922329Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008260:1044440*1044440106265118212Alcanivorax borkumensis SK2, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007954:3171081*3171081321159940519Shewanella denitrificans OS217, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019757:1789237*1789237181237023134Cylindrospermum stagnale PCC 7417, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014012:1421979*1421979144486722889Shewanella violacea DSS12, complete genome9e-0660BLASTN svgBLASTP svg
NC_013515:416760*41676043563818879Streptobacillus moniliformis DSM 12112, complete genome9e-0660BLASTN svgBLASTP svg
NC_009832:17191491719149175798638838Serratia proteamaculans 568, complete genome9e-0660BLASTN svgBLASTP svg