Query: NC_010162:5651746 Sorangium cellulosum 'So ce 56', complete genome
Start: 5651746, End: 5674470, Length: 22725
Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria
General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010162:10962500 | 10962500 | 10980099 | 17600 | Sorangium cellulosum 'So ce 56', complete genome | 3e-83 | 317 | BLASTN svg | BLASTP svg |
| NC_010162:9311465 | 9311465 | 9334908 | 23444 | Sorangium cellulosum 'So ce 56', complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
| NC_015740:3486226 | 3486226 | 3509099 | 22874 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_010162:12224154* | 12224154 | 12254254 | 30101 | Sorangium cellulosum 'So ce 56', complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_007347:3204637 | 3204637 | 3235485 | 30849 | Ralstonia eutropha JMP134 chromosome 1, complete sequence | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_009439:4404942* | 4404942 | 4429883 | 24942 | Pseudomonas mendocina ymp, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_010557:316000 | 316000 | 339172 | 23173 | Burkholderia ambifaria MC40-6 chromosome 3, complete sequence | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_011662:386162 | 386162 | 439913 | 53752 | Thauera sp. MZ1T, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_020126:7285452 | 7285452 | 7309372 | 23921 | Myxococcus stipitatus DSM 14675, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008782:1917634 | 1917634 | 1945599 | 27966 | Acidovorax sp. JS42, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008095:1428665 | 1428665 | 1458874 | 30210 | Myxococcus xanthus DK 1622, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_008741:15699 | 15699 | 38105 | 22407 | Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01, | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_012560:3416451 | 3416451 | 3434099 | 17649 | Azotobacter vinelandii DJ, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015711:570910 | 570910 | 598643 | 27734 | Myxococcus fulvus HW-1 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015850:1497998 | 1497998 | 1521691 | 23694 | Acidithiobacillus caldus SM-1 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015850:736680 | 736680 | 758153 | 21474 | Acidithiobacillus caldus SM-1 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_020126:204216 | 204216 | 222914 | 18699 | Myxococcus stipitatus DSM 14675, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_021150:3416450 | 3416450 | 3434099 | 17650 | Azotobacter vinelandii CA6, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015563:4629436 | 4629436 | 4652196 | 22761 | Delftia sp. Cs1-4 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015422:704500 | 704500 | 758612 | 54113 | Alicycliphilus denitrificans K601 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013851:3321853* | 3321853 | 3352562 | 30710 | Allochromatium vinosum DSM 180 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |