Pre_GI: BLASTN Hits

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Query: NC_010162:5651746 Sorangium cellulosum 'So ce 56', complete genome

Start: 5651746, End: 5674470, Length: 22725

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010162:10962500109625001098009917600Sorangium cellulosum 'So ce 56', complete genome3e-83317BLASTN svgBLASTP svg
NC_010162:93114659311465933490823444Sorangium cellulosum 'So ce 56', complete genome3e-24121BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_010162:12224154*122241541225425430101Sorangium cellulosum 'So ce 56', complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007347:32046373204637323548530849Ralstonia eutropha JMP134 chromosome 1, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010557:31600031600033917223173Burkholderia ambifaria MC40-6 chromosome 3, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_011662:38616238616243991353752Thauera sp. MZ1T, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_020126:72854527285452730937223921Myxococcus stipitatus DSM 14675, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008782:19176341917634194559927966Acidovorax sp. JS42, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008095:14286651428665145887430210Myxococcus xanthus DK 1622, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008741:15699156993810522407Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,7e-0763.9BLASTN svgBLASTP svg
NC_012560:34164513416451343409917649Azotobacter vinelandii DJ, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015711:57091057091059864327734Myxococcus fulvus HW-1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015850:14979981497998152169123694Acidithiobacillus caldus SM-1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015850:73668073668075815321474Acidithiobacillus caldus SM-1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020126:20421620421622291418699Myxococcus stipitatus DSM 14675, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021150:34164503416450343409917650Azotobacter vinelandii CA6, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015563:46294364629436465219622761Delftia sp. Cs1-4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015422:70450070450075861254113Alicycliphilus denitrificans K601 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013851:3321853*3321853335256230710Allochromatium vinosum DSM 180 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg