Pre_GI Gene

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Host: NC_010162 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010162:12224154 Sorangium cellulosum 'So ce 56', complete genome

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1222415412224945792putative proteaseQuickGO ontologyBLASTP
12224935122260411107hypothetical proteinBLASTP
12226038122272521215hypothetical proteinBLASTP
1222725712227544288hypothetical protein
12228278122299931716acetolactate synthaseQuickGO ontologyBLASTP
122300381223114111043-oxoacyl-acyl-carrier-protein synthase III related proteinQuickGO ontologyBLASTP
1223233412232741408hypothetical protein
12232936122366253690hypothetical proteinBLASTP
12237456122413703915hypothetical proteinBLASTP
122418211224191696hypothetical proteinBLASTP
1224419212245100909hypothetical proteinBLASTP
12245105122462021098hypothetical proteinBLASTP
12246214122477491536PE-PGRS family proteinQuickGO ontologyBLASTP
12247787122493431557hypothetical proteinBLASTP
12249436122506111176hypothetical proteinBLASTP
12250826122519471122ECF family RNA polymerase sigma factorQuickGO ontologyBLASTP
1225206712252963897no similarityQuickGO ontologyBLASTP
1225325612254086831hypothetical proteinBLASTP
1225409012254254165hypothetical protein