Query: NC_010162:11812211 Sorangium cellulosum 'So ce 56', complete genome
Start: 11812211, End: 11833067, Length: 20857
Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria
General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_014210:2597000 | 2597000 | 2637446 | 40447 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 2e-71 | 278 | BLASTN svg | BLASTP svg |
NC_013093:915248 | 915248 | 937406 | 22159 | Actinosynnema mirum DSM 43827, complete genome | 1e-54 | 222 | BLASTN svg | BLASTP svg |
NC_014323:3292082* | 3292082 | 3319435 | 27354 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 4e-54 | 220 | BLASTN svg | BLASTP svg |
NC_015563:5289875 | 5289875 | 5310942 | 21068 | Delftia sp. Cs1-4 chromosome, complete genome | 4e-39 | 170 | BLASTN svg | BLASTP svg |
NC_010162:8585856* | 8585856 | 8604099 | 18244 | Sorangium cellulosum 'So ce 56', complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_010162:8528116 | 8528116 | 8553297 | 25182 | Sorangium cellulosum 'So ce 56', complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_018750:3315309 | 3315309 | 3338869 | 23561 | Streptomyces venezuelae ATCC 10712, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_010162:8760128 | 8760128 | 8781099 | 20972 | Sorangium cellulosum 'So ce 56', complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009142:5484883 | 5484883 | 5509669 | 24787 | Saccharopolyspora erythraea NRRL 2338, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013859:421500 | 421500 | 443180 | 21681 | Azospirillum sp. B510 plasmid pAB510e, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010694:1932126 | 1932126 | 1956500 | 24375 | Erwinia tasmaniensis, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010162:12224154* | 12224154 | 12254254 | 30101 | Sorangium cellulosum 'So ce 56', complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |