Pre_GI: BLASTN Hits

Some Help

Query: NC_010162:11812211 Sorangium cellulosum 'So ce 56', complete genome

Start: 11812211, End: 11833067, Length: 20857

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014210:25970002597000263744640447Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-71278BLASTN svgBLASTP svg
NC_013093:91524891524893740622159Actinosynnema mirum DSM 43827, complete genome1e-54222BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome4e-54220BLASTN svgBLASTP svg
NC_015563:52898755289875531094221068Delftia sp. Cs1-4 chromosome, complete genome4e-39170BLASTN svgBLASTP svg
NC_010162:8585856*8585856860409918244Sorangium cellulosum 'So ce 56', complete genome3e-21111BLASTN svgBLASTP svg
NC_010162:85281168528116855329725182Sorangium cellulosum 'So ce 56', complete genome4e-1487.7BLASTN svgBLASTP svg
NC_018750:33153093315309333886923561Streptomyces venezuelae ATCC 10712, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010162:87601288760128878109920972Sorangium cellulosum 'So ce 56', complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009142:54848835484883550966924787Saccharopolyspora erythraea NRRL 2338, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013859:42150042150044318021681Azospirillum sp. B510 plasmid pAB510e, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010694:19321261932126195650024375Erwinia tasmaniensis, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010162:12224154*122241541225425430101Sorangium cellulosum 'So ce 56', complete genome2e-0661.9BLASTN svgBLASTP svg