Pre_GI: BLASTN Hits

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Query: NC_009512:2782000 Pseudomonas putida F1, complete genome

Start: 2782000, End: 2804218, Length: 22219

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-36163BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome1e-36163BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome1e-32149BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome2e-22115BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_002516:23067762306776232728720512Pseudomonas aeruginosa PAO1, complete genome1e-20109BLASTN svgBLASTP svg
NC_015379:3736500*3736500376722330724Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-20107BLASTN svgBLASTP svg
NC_008781:28839682883968290914025173Polaromonas naphthalenivorans CJ2, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015593:2103815*2103815214825244438Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete1e-1179.8BLASTN svgBLASTP svg
NC_014315:27870892787089281864431556Nitrosococcus watsoni C-113 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007614:16628741662874168304820175Nitrosospira multiformis ATCC 25196 chromosome 1, complete7e-1073.8BLASTN svgBLASTP svg
NC_015711:72654397265439729106325625Myxococcus fulvus HW-1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011757:1146608*1146608117421827611Methylobacterium chloromethanicum CM4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015458:19388601938860196301624157Pusillimonas sp. T7-7 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002947:4293252*4293252431746924218Pseudomonas putida KT2440, complete genome3e-0661.9BLASTN svgBLASTP svg