Query: NC_009092:2833865 Shewanella loihica PV-4, complete genome
Start: 2833865, End: 2860272, Length: 26408
Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010334:3224009 | 3224009 | 3244173 | 20165 | Shewanella halifaxensis HAW-EB4, complete genome | 9e-127 | 462 | BLASTN svg | BLASTP svg |
NC_009901:3148901 | 3148901 | 3174373 | 25473 | Shewanella pealeana ATCC 700345, complete genome | 8e-115 | 422 | BLASTN svg | BLASTP svg |
NC_004347:3197219 | 3197219 | 3221825 | 24607 | Shewanella oneidensis MR-1, complete genome | 3e-99 | 371 | BLASTN svg | BLASTP svg |
NC_009052:3229775 | 3229775 | 3254441 | 24667 | Shewanella baltica OS155, complete genome | 2e-96 | 361 | BLASTN svg | BLASTP svg |
NC_008322:1708631* | 1708631 | 1731142 | 22512 | Shewanella sp. MR-7, complete genome | 1e-91 | 345 | BLASTN svg | BLASTP svg |
NC_008321:1636148* | 1636148 | 1659767 | 23620 | Shewanella sp. MR-4, complete genome | 1e-91 | 345 | BLASTN svg | BLASTP svg |
NC_008577:1690946* | 1690946 | 1714438 | 23493 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 1e-79 | 305 | BLASTN svg | BLASTP svg |
NC_008700:2607526 | 2607526 | 2631538 | 24013 | Shewanella amazonensis SB2B, complete genome | 3e-65 | 258 | BLASTN svg | BLASTP svg |
NC_008345:3199965 | 3199965 | 3226063 | 26099 | Shewanella frigidimarina NCIMB 400, complete genome | 2e-23 | 119 | BLASTN svg | BLASTP svg |
NC_009348:2034500* | 2034500 | 2057599 | 23100 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_008781:2883968 | 2883968 | 2909140 | 25173 | Polaromonas naphthalenivorans CJ2, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_011748:2655989* | 2655989 | 2688232 | 32244 | Escherichia coli 55989, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
CU928145:2655989* | 2655989 | 2688232 | 32244 | Escherichia coli 55989 chromosome, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_011083:2542876 | 2542876 | 2568855 | 25980 | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015733:1793399* | 1793399 | 1818021 | 24623 | Pseudomonas putida S16 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
CP002516:1475521* | 1475521 | 1497093 | 21573 | Escherichia coli KO11, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
CP002185:2608000* | 2608000 | 2631068 | 23069 | Escherichia coli W, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_021150:2348214* | 2348214 | 2383273 | 35060 | Azotobacter vinelandii CA6, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012560:2348202* | 2348202 | 2383261 | 35060 | Azotobacter vinelandii DJ, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |