Pre_GI: BLASTN Hits

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Query: NC_009012:2953638 Clostridium thermocellum ATCC 27405, complete genome

Start: 2953638, End: 3017543, Length: 63906

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009012:1857845*1857845188009922255Clostridium thermocellum ATCC 27405, complete genome03380BLASTN svgBLASTP svg
NC_020134:42050042050044762627127Clostridium stercorarium subsp. stercorarium DSM 8532, complete1e-56230BLASTN svgBLASTP svg
NC_011898:3973627*3973627401595242326Clostridium cellulolyticum H10, complete genome5e-41178BLASTN svgBLASTP svg
NC_014376:3796990*3796990382056323574Clostridium saccharolyticum WM1 chromosome, complete genome1e-32151BLASTN svgBLASTP svg
NC_007907:22496072249607227250122895Desulfitobacterium hafniense Y51, complete genome6e-28135BLASTN svgBLASTP svg
NC_009012:2927793*2927793295011722325Clostridium thermocellum ATCC 27405, complete genome1e-19107BLASTN svgBLASTP svg
NC_014410:8694*86942877520082Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,1e-1697.6BLASTN svgBLASTP svg
NC_019970:8938*89382966920732Thermoanaerobacterium thermosaccharolyticum M0795, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_014150:25012992501299252472923431Brachyspira murdochii DSM 12563 chromosome, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_012225:12134211213421123659923179Brachyspira hyodysenteriae WA1, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_016048:3983500*3983500400235618857Oscillibacter valericigenes Sjm18-20, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_019908:43600043600045549719498Brachyspira pilosicoli P43/6/78 chromosome, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_013411:27674002767400281319145792Geobacillus sp. Y412MC61, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_014915:19092751909275195426644992Geobacillus sp. Y412MC52 chromosome, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_015555:447844782276918292Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete5e-1075.8BLASTN svgBLASTP svg
NC_012778:19469241946924197078623863Eubacterium eligens ATCC 27750, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_009720:2489003*2489003251980530803Xanthobacter autotrophicus Py2, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_011898:3159411*3159411320519745787Clostridium cellulolyticum H10, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_013517:104480*10448012509920620Sebaldella termitidis ATCC 33386, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_015732:30173873017387304410826722Spirochaeta caldaria DSM 7334 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_015589:1630461*1630461165846428004Desulfotomaculum ruminis DSM 2154 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_011898:1558208*1558208159278834581Clostridium cellulolyticum H10, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_015958:11511115113009918589Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_011126:28192628192630475922834Hydrogenobaculum sp. Y04AAS1, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_020409:363114*36311438759924486Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete8e-0661.9BLASTN svgBLASTP svg
NC_007516:774489*77448981616441676Synechococcus sp. CC9605, complete genome8e-0661.9BLASTN svgBLASTP svg